Helicobacter pylori Shi112: HPSH112_04825
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Entry
HPSH112_04825 CDS
T02037
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
hhp
Helicobacter pylori Shi112
Pathway
hhp00900
Terpenoid backbone biosynthesis
hhp01100
Metabolic pathways
hhp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hhp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HPSH112_04825
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hhp01006
]
HPSH112_04825
Enzymes [BR:
hhp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HPSH112_04825
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HPSH112_04825
Prenyltransferases [BR:
hhp01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HPSH112_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AFI01164
LinkDB
All DBs
Position
988700..989611
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AA seq
303 aa
AA seq
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MNNPNLSFYHNECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCA
LVGQKDYSNRQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVL
IGDALNTYSFELLSNSLLESHIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLT
FLHEHKTAKLISASLMMGFVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEES
GKTTHLDGAKNSFVNLLGLEKASGYAQTLKTEVLDDLNLLKPAYPLLQENLNALLNTLFK
GKT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccctaatttatccttttaccataatgagtgcgagcgttttgaaagcttttta
aaccaccatcatttacaccttgaaagcttccacccttatttggaaaaagccttttttgaa
atggtgcttaatgggggtaaaaggttccgccctaagctttttttagccgtgctttgcgcg
ttagtgggtcaaaaagattattctaaccggcaaacagaatattttaaaatcgctttaagc
attgaatgcttgcacacttattcgctcatccatgacgatttaccatgcatggataatgcc
gctttaaggagaaaccaccccactttacacgctaaatacgatgaaaccacagccgtttta
atcggcgatgcgctcaacacttactcttttgaattgctttcaaactctttactagaaagc
catatcattgtggaattgatcaaaatcttaagcgctaatggggggattaaaggcatgatc
ttagggcaggctttggattgctattttgaaaacacgcccttaaatttagagcagctcact
ttcttacacgagcataaaaccgctaaattgattagcgcaagcttgatgatggggtttgtt
gcaagcggtattaaagatgaagagctttttaaatggcttcaggcttttgggttaaaaatg
ggtctttgctttcaagtgttagatgatattatagatgttacacaagatgaagaagaaagc
ggtaaaaccactcatttagacggcgctaaaaacagctttgtgaatttattggggctagaa
aaggcaagcggttacgcccaaactttaaaaacagaggttttagacgatttaaacctacta
aaacccgcttatcctttattgcaagaaaatttgaacgcattattgaacactctatttaaa
ggcaagacatga
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