KEGG   Helicobacter pylori Shi417: HPSH417_00245
Entry
HPSH417_00245     CDS       T02039                                 
Name
(GenBank) Proline/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
hhr  Helicobacter pylori Shi417
Pathway
hhr00250  Alanine, aspartate and glutamate metabolism
hhr00330  Arginine and proline metabolism
hhr01100  Metabolic pathways
hhr01110  Biosynthesis of secondary metabolites
Module
hhr_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    HPSH417_00245
   00330 Arginine and proline metabolism
    HPSH417_00245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hhr03000]
    HPSH417_00245
Enzymes [BR:hhr01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     HPSH417_00245
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     HPSH417_00245
Transcription factors [BR:hhr03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    HPSH417_00245
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: AFH97219
LinkDB
Position
complement(49437..52994)
AA seq 1185 aa
MQKIIDDSLELAKKLQDSISNHLSEQEKAFHSKMQKLLNNPENKVMLIELMDRSFRCLDN
KARFEMIEHVLDKYKSREIFSSFEKLLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLD
QEESQLKERILKRKNEKIILNVNFIGEEVLGEEEANARFEKYSQALKSNYIQYISIKITT
IFSQINILDFEYSKKEIVKRLDALYALALEEEKKQDMPKFINLDMEEFRDLELTVESFME
SIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIAS
VKDWALPTFSNKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHALNDP
VVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNF
MKAFFNLKVGTSEWKDQEQRFLNSLKGIAALDNATHRTQDRNAKQSGHTTYPNHSFKNES
DTDFILKANREWAKKVREKMHNAPILELYPEMDGRFEDPNLTPLEVFDKIHHKKIASVHL
ADKEAILKALEVAKNDKSRFSQKSFTEIHALMSQTAQIFRERRGDLIGISALEVGKTFAE
TDAEVSEAIDFLEFYPYSLRVLQEQNKKTKFAPKGVGVVIAPWNFPVGISVGTIAAPLAA
GNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLKDESIKFAILTG
GEDTAYKMLEANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLL
VLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGALADKPNEKVIKAIDELKSYENYE
IPVSFVNDNPYLMKPSIKYGTKKGDFTHQTELFTPILSVMKAQDLDEAIDIVNSTGYGLT
SALESLDEREWEYYLERIEAGNIYINKPTTGAIVLRQPFGGVKKSAVGFGRKVGIFNYIT
QFVNIHQEEEDENALKNPLSEALEGLTQKGYDEHTHELRRAIFMAKSYAYHYKHEFSQAK
DYVKIRGEDNLFSYTKVKSVGYRITEKDTLSDMLGVVLACLISQIPLTLSTENERANKDL
SFFLECLKALQANTPIVYESLQKFSEKLNAFNRVRYLKSDLDLLHEQASRLGIVLATAKP
CLNGRFELLYYHLERSVSISYHRYGNLGSRVLRRPTCHKSCYAEK
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcattgacgattcgttagaattagccaaaaaactgcaagatagtatcagt
aaccatttgagcgagcaagaaaaagcgttccactctaaaatgcaaaagcttttaaataac
cctgaaaacaaagtcatgctcatagagcttatggatcggagttttagatgcctggacaat
aaagcccgctttgaaatgattgagcatgttttagacaaatacaaaagccgtgagattttt
tcttcgtttgaaaaattgcttttaatggggtttttaagctttgggaaaatgctccctgat
atgagcgtgcctttctttgtcaataaaatcagaagcgacacgaaagcgatggtcttggat
caagaagagagccaattaaaagagcggattttaaaaagaaaaaatgaaaaaatcattttg
aatgtgaattttattggcgaagaggttttaggcgaagaagaagctaatgcgcgttttgaa
aaatactctcaagccctaaaatccaactacatccaatacatttccattaaaatcacaacg
attttttctcaaatcaatatccttgattttgaatattctaaaaaagagattgtcaaacgc
ctagacgctctttatgccctggctttagaagaggaaaaaaagcaagacatgcctaaattt
attaatttggatatggaggaatttagggatttagagctcacggtggagtcttttatggaa
tctatcgctaaatttgatttgaacgctggcattgtgttgcaagcctatatcccggattct
tatgaatatttgaaaaaactgcacgctttttctaaagaaagggttttaaaagggttaaag
cccattaaaatccgctttgttaagggagcgaacatggagagcgaagagactatcgcttct
gtgaaagattgggcgttacccacattttccaataagcaagacaccgattctaattacaat
aaaatgctggattttgttttagagggcgataattataaatacattcatattggtgcagca
agccataatatttttgaaatcgcttatgtctatacgcgcatccatgcccttaatgaccct
gttgtgttagagcattttagctttgaaatgctagagggcatgagcttgcaagcgagccag
gaactaaaagagatgcacaaactcattctttatgcgccggtgtgcgatgaagcgcatttt
aacaatgcgatcgcttacttggtgaggagattagatgaaaacacctcaagcgataatttc
atgaaagctttctttaatcttaaagtaggcacgagcgaatggaaagaccaagaacaacgc
tttttaaacagccttaaaggaatcgctgctttagacaatgccacccacaggactcaagat
agaaacgccaaacaaagcgggcataccacctacccaaaccactcctttaaaaacgaaagc
gataccgattttattttaaaggccaaccgagaatgggctaaaaaagtgcgcgaaaaaatg
cataatgcccctattttagaactttacccagaaatggatgggagatttgaagatcctaat
ttaacccctttagaagtctttgataaaatccatcataaaaaaatcgctagcgtgcattta
gcggataaggaagcgattttaaaagccctagaagtggctaaaaacgataagagccgtttc
agccagaaaagctttacagaaatccatgccttaatgagtcaaaccgcccaaatttttaga
gaaaggcgaggcgatttgatagggatttcggctttagaagtgggtaagactttcgctgaa
acggacgctgaggtgagcgaagccattgactttttagagttttacccttacagcttaagg
gtgttacaagagcaaaataaaaaaacgaaattcgcccccaaaggcgtgggtgtggtcatt
gccccatggaatttccctgtgggcatttctgtaggcactatcgctgcccccctagccgct
ggcaatcgggtgatttacaagccatcaagtttgtctagcgtaacgggttataagctttgt
gagtgtttttgggatgcgggcgtgcctagagatgcgctcatttacttgccctctaaaggg
agcgacattagcgagcatcttttaaaagatgaaagcatcaagtttgccattttaacaggg
ggcgaagacaccgcttataaaatgctagaggctaaccccactttagccttgagtgctgaa
acaggcggtaaaaacgccactattgtgagcaaaatggcagacagagatcaggcgattaaa
aatgttatccattcagcttttagcaattcggggcaaaaatgctccgccacttcgctttta
gtgttggaaaaagaagtctatgaagatgagaactttaaaaagactctaatagatgcgact
ctaagccttagcgtgggcgatccttttgatttcaaaaacaaaatcggcgctctagcggac
aagcctaatgaaaaggtcattaaagctatagacgaattgaaaagctatgaaaattacgaa
atcccggtaagctttgtcaatgataacccctatttgatgaagccaagcatcaaatacggc
actaaaaaaggcgatttcacgcaccaaactgagctttttacgcccatcttatccgtgatg
aaagcgcaagatttagacgaagcgatagacatagtcaattctaccggttacgggctgact
agcgcgttagagtctttggacgaaagggagtgggaatattatctagaacgcattgaagcc
ggcaatatctatatcaacaaacccaccacaggagcgattgtcttacgccagccttttggg
ggggttaaaaaatccgctgtggggtttgggagaaaggtgggcatttttaactatatcacg
caatttgtgaatattcaccaagaagaagaagatgaaaacgccctaaaaaaccccttgagc
gaagctttagaaggcttgactcaaaaaggctatgatgaacacacgcatgagttgaggcgt
gcgatttttatggcaaagagttacgcttatcattacaagcatgaattcagccaagctaaa
gactatgtcaaaatcagaggcgaagacaaccttttttcctacaccaaagttaaaagcgtg
ggctatcgcatcaccgaaaaagacactttaagcgatatgttgggcgttgttttggcatgt
ttaatttctcaaatccctttaacgctcagcacagaaaacgaacgagcgaacaaagattta
tcatttttcttagaatgcttaaaagcgctccaagcaaacacccctattgtttatgaaagc
ttgcaaaaatttagcgagaaattgaacgctttcaatcgtgtccgttatttaaaaagcgat
ttggatttattgcatgaacaagcgagcagattagggattgttttagccacggctaaaccc
tgcttgaacgggcgttttgaattgctgtattaccacttagagcgatcggttagcatctct
tatcatcgttacgggaatttaggctcaagggttttaaggcgaccaacttgccacaaatca
tgttatgctgaaaaataa

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