KEGG   Helicobacter pylori Shi417: HPSH417_07480
Entry
HPSH417_07480     CDS       T02039                                 
Name
(GenBank) type I restriction enzyme M protein (hsdM)
  KO
K03427  type I restriction enzyme M protein [EC:2.1.1.72]
Organism
hhr  Helicobacter pylori Shi417
Brite
KEGG Orthology (KO) [BR:hhr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hhr02048]
    HPSH417_07480
Enzymes [BR:hhr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.72  site-specific DNA-methyltransferase (adenine-specific)
     HPSH417_07480
Prokaryotic defense system [BR:hhr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HPSH417_07480
SSDB
Motif
Pfam: N6_Mtase HsdM_N UPF0020 AviRa MTS
Other DBs
NCBI-ProteinID: AFH98612
LinkDB
Position
complement(1542970..1545432)
AA seq 820 aa
MAIKKSELYSSLWAGADSLRGGMDASEYKNYVLNLLFLKYISDKARNDAKNNTYSEIEVP
QGCFYEDILALEGDKEIGDKLNKIIAEIAEQNDLKGVIDSVDFNDNTKLGEGKAMIDTLS
NLVKIFADLSLGAHGALDDDLLGDAYEYLMRHFASESGKSKGQFYTPSEVSLLLSLLLGI
DANTRQDKSIYDPTCGSGSLLLKASSLAGKNGLTIYGQEKDISTTALCKMNMILHNSADA
DIAKGGSSTLSNPFFIKNGMLQTFDYVVANPPFSLKNWTDGLSIDPKSKQVINDSFNRFE
DGTPPEKNGDFAFLLHIIKSLKDTGKGAVILPHGVLFRGNAEGVIRKNLLTKGYIKGVIG
LAPNLFYGTSIPACVIVLDKENARARKGVFLIDASKDFKKDGNKNRLREQDVQKMIDTFN
ALKEIPYYSKMVSLEEISANDYNLNIARYIAAKQESEKDLFALINSHKASYLPKNEIEAY
APYFQVFKELKNTLFKKSDKEGYYALKTECKNIKDLITQSSEYQAFHACVLNAFDRLNLF
ETFDHLEPGFNPKTLIESVCSKVLKEFEKVEILDKYGVYQLFKDYYNEVLQDDWFLLSFN
DFLSAKELRELNPLKDKNKKANYLEEPDFVIQKTYYKSDLIPKNLIKQRFFEKEAKELEQ
LENALNEKEADFEEFIEEHSSEEGLFYELKINESVLKKELKNATDLEDKKILKTALELLE
AKNKALKMKNKAHEELELKAFHQYKNLKLGEIKDLIIQDKWLKSLKNALENKILKRINAF
TSALNKIISNYSNSLLELDKEVKESESKVLEHLKDLGVVV
NT seq 2463 nt   +upstreamnt  +downstreamnt
atggcgatcaaaaaaagcgaattgtatagctctttatgggctggggcggatagtttaagg
ggcggaatggatgcgagcgagtataaaaactatgttttgaacttgctttttttaaaatac
atcagcgataaagccagaaatgacgctaaaaacaatacttatagcgaaatagaagtgccg
caagggtgtttttatgaagacattctcgctttagagggcgataaagaaataggcgacaag
ctcaataaaatcatcgcagaaatcgcagagcaaaacgacttaaaaggcgtgattgacagc
gtggattttaacgataacaccaagcttggagagggtaaagcgatgatagacaccctttct
aatttggttaaaatctttgccgatttgagtttgggcgcgcatggggctttagacgatgat
ttattgggtgatgcttacgaatatttaatgcgccactttgccagcgaatccggtaaatcc
aaagggcagttttacacccctagcgaagtttcgcttttattgtcccttttgcttggcatt
gatgcaaacaccagacaggataaaagcatctatgatcccacttgcgggagcggttcgtta
ttgttaaaagcttctagcttggcgggcaaaaacggcttaactatctatggtcaagaaaaa
gacatttccacaacagccctttgtaaaatgaatatgattttacacaatagcgctgatgct
gatattgctaaagggggttctagcaccctttctaaccccttttttattaaaaacggcatg
ctgcaaacctttgattatgtcgtggctaaccctccctttagcttgaaaaactggactgat
gggctaagcatagaccctaaaagcaagcaagtcattaacgatagtttcaatcgttttgaa
gacggcacgccccctgaaaaaaatggcgatttcgcttttttgctccatatcatcaaatcc
ctaaaagacacaggcaaaggggcagtgattttaccccatggggtgctatttagagggaat
gctgagggagtaattagaaaaaatcttttaacaaaaggctatattaaaggcgtgataggc
ctagcccctaatcttttttatggcacttccattcctgcatgcgtgattgttttagacaaa
gaaaacgcgcgcgccagaaagggcgtttttttgatagatgcgagcaaggattttaaaaaa
gacggcaataaaaaccgcctaagagagcaagatgtccaaaaaatgatagacacttttaac
gctttaaaagaaatcccttattattccaaaatggtaagcctagaagaaattagcgctaac
gactataacttgaatatcgcgcgctacattgccgccaaacaagaatcagaaaaagacttg
ttcgctttaatcaacagccacaaggctagttatttgcccaaaaacgaaattgaagcctac
gccccttattttcaagtgtttaaagagcttaaaaacacgctttttaaaaagagcgataaa
gagggttattacgctttaaaaacagaatgcaaaaacattaaagatctaatcacccaaagc
tcagaataccaagctttccacgcttgtgttttaaacgcttttgaccgattgaatctgttt
gaaacttttgatcatttagagccaggttttaacccaaaaaccctcatagagagcgtttgc
tcaaaggttttaaaagaatttgaaaaggtagaaattttagacaaatacggcgtgtatcag
ctctttaaagattactacaacgaagttttacaagacgattggttccttctttcattcaat
gattttttgagcgctaaagaattaagggaattaaaccccctaaaagacaaaaacaaaaaa
gccaactatttagaagagccggattttgtcattcaaaaaacctactataaaagcgatcta
atccctaaaaacttgatcaaacaacgcttttttgaaaaagaagcaaaagaattagaacaa
ttagaaaacgccctcaatgaaaaagaagctgattttgaagaatttatagaagagcattct
agtgaagaagggcttttttatgaattgaaaatcaatgaaagcgttttgaaaaaagagcta
aaaaacgccaccgatttagaagataaaaaaatcctaaaaaccgctttagaattgctagaa
gctaaaaacaaggcgctaaaaatgaaaaataaagcccatgaggagctggaattaaaagcg
ttccaccagtataaaaacctgaaattaggcgaaattaaggatctcatcatccaagacaaa
tggcttaagagcctaaaaaacgccctagaaaacaaaattttaaaacgcatcaacgctttt
actagtgcccttaataaaatcatttcaaactactctaacagcttgttagaattagacaaa
gaagtcaaagaaagcgaatcaaaagttttagagcatttgaaagatttgggggttgtagtt
tga

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