Candidatus Pantoea carbekii: HHS_00940
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Entry
HHS_00940 CDS
T02865
Symbol
rfaF
Name
(GenBank) RfaF protein
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs00540
Lipopolysaccharide biosynthesis
hhs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HHS_00940 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hhs01005
]
HHS_00940 (rfaF)
Enzymes [BR:
hhs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
HHS_00940 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
hhs01005
]
Core region
HHS_00940 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Motif
Other DBs
NCBI-ProteinID:
BAO00064
UniProt:
U3U734
LinkDB
All DBs
Position
complement(131780..132826)
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AA seq
348 aa
AA seq
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MINILVIGPSWIGDMMMSHSLYRTIKSQYPEAVIDVMAPDWCRSLLLRMPEVNKGLLLPF
KHGELALKKRFYLGKFLQKNGLYDRAYILPNSFKSALVPFFAKIKRRIGWRGEMRYGLLN
DIRVLDKSKFPLMVERYIALAYDQPVHSSNLLPKPLLWPRLKVEENEKRLLMQQFILPND
KLIIGFCPGAEFGPAKCWPYYYYALLAEQLIYEGYQVILLGAKKERKIGQAIIQTLSNTT
HSHCSNLIGHTKLEEAVILISLCTAIVSNDSGLMHIAAALNCPIVALYGPSSPNFTPPLS
NKTRIIHLSSHYDNIRTGNTKDGYHQSMINILPKLVYQELNTLLYSIK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgataaatattctagtgattggaccttcgtggattggtgatatgatgatgtcacatagc
ctttatcgtacaattaaatctcaatatcctgaagcagtaattgacgtgatggcaccagat
tggtgtcgatcgttgttattacgaatgccagaggtcaataaaggactattgctacccttt
aagcatggagagctagcattaaaaaaacgattttatttaggtaaatttttacaaaaaaat
ggtctttatgatcgtgcttatatattacccaattcttttaagtcagccttagtgccattt
tttgctaagattaagcgaagaattggttggcgtggtgaaatgcgttacggtttattaaat
gatatacgtgttttagataaatctaaatttccattaatggttgaacgttacatagcatta
gcatatgatcaacctgttcattcctcgaatttattacccaaaccattattatggccaagg
ttaaaagttgaagaaaatgaaaaacgtcttttaatgcagcagttcatattgccaaacgac
aaacttataatcggattttgtccaggtgcagaatttggtccagcaaaatgttggccgtat
tattactatgcattattagcagagcagctaatttatgaaggttatcaagtaatactatta
ggtgcaaaaaaggaaagaaaaataggtcaagcaattatacaaacactatcaaacacaact
catagccattgcagtaatttaataggccatacaaaacttgaagaggcggtaattctgata
tcactatgtactgcaatagttagtaatgattcaggtctaatgcatattgctgcagcgctt
aattgtcctatagtagctttatatggacccagtagtcctaattttactccgcctttatct
aataaaacacgtattattcatctcagcagtcattatgataacatacgcacaggtaatact
aaagacggctatcatcaaagtatgattaatatcttgcctaaacttgtatatcaggaatta
aatacccttttatattctataaaataa
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