Halodesulfurarchaeum formicicum HSR6: HSR6_1606
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Entry
HSR6_1606 CDS
T04550
Symbol
rpoB2
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HSR6_1606 (rpoB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhsr03021
]
HSR6_1606 (rpoB2)
Enzymes [BR:
hhsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HSR6_1606 (rpoB2)
Transcription machinery [BR:
hhsr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HSR6_1606 (rpoB2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
DUF5715
Motif
Other DBs
NCBI-ProteinID:
APE96047
UniProt:
A0A1D8S5S6
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All DBs
Position
complement(1547789..1549351)
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AA seq
520 aa
AA seq
DB search
MQTEQRRKLSRSYFSKERLADHHFRSFNAFLERGMQEVVTEKERIETEIGDKEDEEPVWV
ELGDVRVVTPRVREADGSEELLYPQEARLRNITYAAPVFMEMTIKRGGEEEPIEVLDTTE
TKVGRMPIMVGSQKCNIAGFDDEELIEIGEDPADPGGYFIINGSERVLMTSEDLAPNKIL
AEYDTKYGDEIQVAKTFSQRRGYRALVLVERNREGLLEVSFPSISGSIDFVTLVRALGLE
SDEEIVHRVSDDPEIVKFMLENLEEASVQTQEEAIEELGKRVASGQGKNYQLKRANYVID
RYLLPHLHEDEVEEEDVRINKAYYLCRMAEAAFELALHRRQSDDKDHYANKRLKVSGDLM
TDLFRTALNKLARDVKYQLERANMRNRQLTVTTVVRSDVLTERLEHPIATGNWVGGRSGV
SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
AQAMELSQHVEDERELKAELASMGVEGIPEITTEHTPADD
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacggaacaacgacgcaaactgtcccggtcgtacttctcgaaggaacgactcgcc
gaccaccacttccgctcctttaacgcgttcctcgaacgcggcatgcaggaggtcgtcacc
gagaaagaacgcatcgagaccgaaatcggtgacaaggaagacgaagaaccggtctgggtc
gaactcggcgacgtgcgcgtggtcacgccccgcgtccgcgaggccgacggctccgaagaa
ctcctctacccccaggaggcccgcctgcgcaacatcacctacgccgcgccggtcttcatg
gagatgacgatcaaacgcggtggcgaggaggaacccatcgaagtgctcgacaccaccgag
accaaggtcggccgcatgccgatcatggtcggctcccagaagtgcaacatcgccggcttc
gacgacgaggaactcatcgagatcggcgaggaccccgccgaccccggtgggtacttcatc
atcaacggctccgagcgagtcctgatgacaagcgaggacctcgcgccgaacaagatcctc
gcggagtacgacaccaagtacggcgacgagatccaggtcgcaaagaccttctcccagcgc
cgcgggtatcgggcgctggtgctcgtcgagcggaatcgcgagggcctgcttgaggtctcc
ttcccgagcatctcgggttcgatcgacttcgtcacgctggtccgggccctcggcctggag
tccgacgaggagatcgttcatcgggtctccgacgacccggagatcgtgaagttcatgctg
gagaatttggaggaagccagcgtccagacccaggaggaagccatcgaggaactgggcaag
cgcgtggcctccggccaggggaagaactaccagctcaaacgcgcgaactacgtgatcgac
cgctacctgctcccacatctccacgaggacgaggtcgaggaggaggacgtgcggatcaac
aaggcctactatctctgccggatggccgaggcggccttcgagctggccttacaccgccgg
cagtccgacgacaaggaccactacgccaacaagcgcctgaaggtctcgggcgatctgatg
accgacctcttccggacggcgctcaacaagctcgctcgcgacgtgaaataccagctcgag
cgggccaacatgcgcaaccgacagctcacggtcaccaccgtggtccgatccgacgtgctc
accgaacgcctcgagcacccgatcgcgacggggaactgggtcggcggccgatccggcgtc
tcccagctggtcgaccgcaccgactacatgggggttctctcacaccttcgccggctccgg
agcccgctctcccggagccagccgcacttcgaagcccgtgacctgcacgccactcagtgg
gggcggatctgcccctccgagaccccggagggtccgaactgtgggctcgtgaagaacttc
gcccaggcgatggaactctcccagcacgtcgaggacgaacgggaactcaaggccgaactc
gcctcgatgggcgtcgagggcatcccggagatcactaccgaacacacaccggcagacgat
taa
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