Halodesulfurarchaeum formicicum HSR6: HSR6_1930
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Entry
HSR6_1930 CDS
T04550
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhsr03016
]
HSR6_1930
Enzymes [BR:
hhsr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
HSR6_1930
Transfer RNA biogenesis [BR:
hhsr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
HSR6_1930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
SPL
Motif
Other DBs
NCBI-ProteinID:
APE96362
UniProt:
A0A1D8S6N6
LinkDB
All DBs
Position
complement(1894158..1895405)
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AA seq
415 aa
AA seq
DB search
MARYYIETYGCTANRGESRHIERRLRDGGHRPVESPEAADVVILNTCTVIETTENNMLRR
AAELDSGTDLIVTGCMALAQETAFEEAGVDAQVLGWDEVPQAVGNGECPTVTPDTEPILD
GVIGILPLARGCMSDCSYCITKAATGRIDSPPVERNLDRARELLDAGAREIRITGQDTGV
YGLDQGERWLPELLRGLCDLDGDFRVRIGMANPWGIYPIREEIATLLAECPKLYNFLHLP
VQSGSDSVLDAMRRQHSVAEFREIVNTLDRTLDEWTLATDFVVGFPTETEADHQESVHLL
ETVEPETINVTRFSKRPGTDAADMKGLGGTVKKERSKDLSARKAEIVGAVHEDLLGTRRE
VMAVEPGTGDSIQAYDDAYHRIVVPGELTGDRSLGERFEVTITDHNTFYAFGEPV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtactacatcgagacctacgggtgtacggccaaccggggcgagagccgccac
atcgagcggcggctccgtgacggcgggcaccggccggtcgagtcacccgaggccgccgat
gtggtgatcctcaacacctgtaccgtgatcgagaccacggagaacaacatgctccgccgg
gccgccgaactcgattctggaacggatctcatcgtcacgggctgtatggcactggcccag
gagacggccttcgaagaggccggcgtggacgcccaggtgctgggctgggacgaggtaccc
caggccgtcggcaacggggagtgtccgactgtcacgcccgacactgaaccgattctggat
ggcgtgatcggcattctgcccctcgctcgtggctgcatgagcgactgttcgtactgcatc
accaaggccgcgaccgggcgcatcgactcgccgccggtcgagcggaacctcgaccgggcc
cgcgaactgctcgacgcgggggcccgcgagatccggatcaccggccaggacacgggcgtc
tacggcctcgatcagggcgagcgatggctcccggagttgctccgggggctctgtgatctc
gacggggacttccgggtccggatcgggatggcaaacccctgggggatctacccgatccgg
gaggagatcgccaccctcctcgcggagtgccccaaactctacaacttcctccacctgccg
gtccagtcgggctctgattccgtcctcgacgcaatgcgtcgtcagcactcagtcgcggag
ttccgcgagatcgtcaacaccctcgatcggactctcgatgagtggacgctggcgacggat
ttcgtcgtcggctttcccacggagaccgaggccgaccaccaagagagcgtgcatctcctg
gaaactgtcgaacccgagaccatcaacgtcacccgcttctcgaagcgcccggggaccgac
gcggctgacatgaaggggctcggcggcacggtcaagaaggagcgctcgaaggacctctcg
gcacgcaaggcggagatcgtcggggcggtccacgaagacctgctgggcacccgacgtgag
gtcatggccgtcgaaccaggcacgggggactcgatccaggcctacgacgacgcctaccac
cggatcgtcgtcccgggcgaactgaccggggaccgctcactcggcgagcgcttcgaggtc
acgatcacggatcacaacaccttctacgccttcggcgagccggtctag
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