Halodesulfurarchaeum formicicum HSR6: HSR6_2024
Help
Entry
HSR6_2024 CDS
T04550
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase, class I
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HSR6_2024 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hhsr01007
]
HSR6_2024 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhsr03016
]
HSR6_2024 (lysS)
Enzymes [BR:
hhsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HSR6_2024 (lysS)
Amino acid related enzymes [BR:
hhsr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HSR6_2024 (lysS)
Transfer RNA biogenesis [BR:
hhsr03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HSR6_2024 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
APE96453
UniProt:
A0A1D8S6Y2
LinkDB
All DBs
Position
complement(1974679..1976328)
Genome browser
AA seq
549 aa
AA seq
DB search
MPDETDPYVLDSVDSRRVFWADTVADLIEAREPTEPIVIKGGISPSGVPHFGNMNEIVRG
YFVAEVLRERGYTVRQVFTSDDRDPLRKLPRKLAALDGEIVDLGAVDAGALGRNLGKPYT
DIPDPFGCCDSYGAHFASLVEQSAAALDIPVEMISNTEQYEDGAFEAATRTVLERADEAR
ELLAAYQDKVDAEYVPFNPICENCGQITETVTDVDLEAGTVSYRCTDMEAGDQVIEGCGH
EGTTSLRNGKLPWRFEWPAQWQLLGVDHEPFGKDHAEGSWPSGAEISRAIFDHQPPVPMV
YEWFTLDGAPFSSSAGNVILVSEVLEFLEVPVVKYFFSKDPRKARDFSIEHADQLVAEFD
RLEAIYFDEIEDASEDERKRAERVYPFLVDSIRPERIRIPFSFAAVLGMTEDEALREEIA
RREGHIPDDAPEWAIEAALDRVERAREWARRTDNAFNYDLKRASMPTVEIDEPTAAALDD
LADFIEAGASPEEIQGEIYETARRHDIDVGDFFATGYRLFFDQPEGPKLGTFLGKLDEPF
VLARLRRER
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgagacagacccctatgtcctcgactcggtggactcccggcgggtcttctgg
gccgatacggttgcggacctgatcgaggccagagagccgaccgaacccatcgtcatcaag
ggtggcatctcgccctcgggggtcccacacttcggcaacatgaacgagatcgttcggggc
tacttcgtcgccgaggtgctccgcgaacggggctatacggtccggcaggtcttcaccagc
gacgaccgggatccgcttcgcaaacttccgcggaagctggccgctctcgacggggagatc
gtcgacctgggagccgtcgatgccggggcgctcggccggaacctgggcaagccatacacc
gacattcccgaccccttcggctgctgtgactcctatggcgcgcacttcgcgagcctcgtg
gagcagtcggcggcggcactcgacatcccggtggagatgatctcgaacaccgagcagtac
gaggacggcgccttcgaggccgccacgcgaacggtcctcgaacgggccgacgaggctcgt
gagttgctcgcggcctaccaggacaaagtcgacgcggagtatgtcccgttcaacccgatc
tgtgagaactgcggtcagattaccgagacggtgacggacgtcgacctggaggcgggtacg
gtctcgtaccgatgtacagatatggaggccggcgaccaggtcatcgagggctgtggacac
gagggcacgacctcgctccgaaacgggaaactcccctggcggttcgagtggccggcccag
tggcaactgctgggggtggaccacgagcccttcggcaaggaccacgccgaggggtcctgg
cccagcggcgcggagatctcccgggcgatcttcgaccaccagcccccggtgccgatggtc
tacgagtggttcaccctcgacggcgcgcccttctcctcctcggcgggcaacgtcatcctc
gtctcggaggtcctggagtttctggaagtgccggtagtcaagtacttcttcagcaaggac
ccccggaaggccagggacttctcgatcgaacatgccgaccagctggtcgcggagttcgac
cgcctggaggcgatctacttcgacgagatcgaggacgcaagcgaggacgaacgaaagcgg
gccgagcgggtctatcccttcctcgtggactcgatccgccccgagcggatccggattccc
ttctcctttgccgcggtccttggcatgaccgaggacgaggcgcttcgggaggagatcgcg
cgacgggagggccacattcccgacgacgcccccgagtgggcgatcgaggcggccctcgac
cgcgtcgagcgagcccgggagtgggcccgtcggactgacaacgccttcaactacgacctc
aagcgggcctcgatgcccaccgtggaaatcgacgagccgacggcggcggccctggacgac
ctcgcggacttcatcgaggcgggggccagccccgaggagatccagggcgagatctacgag
acggctcgccgacacgacatcgacgtcggggactttttcgccacggggtatcgactcttc
ttcgaccagcccgaggggccgaaactcggtaccttcctcgggaaactcgacgagcccttc
gtgctggcacggttgcgccgggagcgctag
DBGET
integrated database retrieval system