Herbaspirillum hiltneri: F506_09970
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Entry
F506_09970 CDS
T04039
Symbol
garD
Name
(GenBank) galactarate dehydrogenase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht00053
Ascorbate and aldarate metabolism
hht01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
F506_09970 (garD)
Enzymes [BR:
hht01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
F506_09970 (garD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
AKZ62951
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All DBs
Position
2202805..2204385
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AA seq
526 aa
AA seq
DB search
MSAETTTQASNTNIPRYILMHENDNVAIVVNDRGLPAGTVFPDGLTLVSQVPQGHKIALR
DIAQGEAIIRYDVAIGYAARDIAKGSWIEESVVTLPPARELDNLPIATRKAPELASVPLE
GYTFEGYRNADGSVGTRNLLAITTTVQCVAGVVEHAVKRIREELLPKYPNVEDVVALEHT
YGCGVAIDAPNADIPIRTLRNISLNPNFGGQAMVVSLGCEKLQPNRLLPESIIPIHKEGE
AYVVCLQDSEHVGFNSMIDSILKMAELRLQELDKRRRVTCPASDLVVGVQCGGSDAFSGV
TANPAVGFATDLLVRAGAAVMFSEVTEVRDGIDQLTSRAINEEVAQAMIREMDWYDSYLQ
KGGVDRSANTTPGNKKGGLANIVEKAMGSIVKSGSAPISGVLAPGDKLKQKGLIYAATPA
SDFVCGTLQLAAGMNLHIFTTGRGTPYGLAAVPVIKVATRNDLARRWHDLMDVNAGRIAS
GEATIADVGWELFQLMLDVASGRKQTWAEKWKLHNALTLFNPAPIT
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgaaacaaccactcaagccagcaacaccaatattcctcgctacatcctgatg
cacgagaacgacaacgtcgccatcgtcgtcaacgaccgcggcctgccggccggcacggtt
tttccggatggcctgacgctggtcagccaggtgccgcaaggccacaagatcgccttgcgc
gatattgcccagggcgaagcgatcatccgctacgacgtcgccatcggctatgccgcgcgc
gatatcgccaaaggcagctggatcgaagaatcggtggtgaccttgccgccggcgcgcgaa
ctcgacaacctgccgatcgccacgcgcaaggcgcccgagctggcctcggtgccgctggaa
ggctataccttcgaaggctatcgcaacgccgacggttcggtcggcacgcgcaacctgctg
gcgatcaccaccaccgtgcaatgcgtggccggcgtggtcgagcatgcggtcaagcgcatc
cgtgaggagctgctgccgaagtatcccaatgtcgaagacgtggtggcgctggaacacacc
tacggctgcggcgtcgccatcgatgcgcccaacgccgacatccctatccgcacattgcgc
aacatcagcctgaaccccaacttcggcggccaggcgatggtggtcagcctcggttgcgaa
aagctgcaacccaatcgcctgctgccggaaagcatcatcccgatccacaaggagggcgag
gcttacgtggtctgcctgcaggattcggaacacgtcggcttcaactcgatgatcgactcc
attttgaagatggccgaattgcgcctgcaggaactcgacaagcgccgtcgcgtgacttgc
ccggcgtcggatctggtggtcggcgtgcagtgcggcggtagcgacgccttctcgggcgtg
accgccaacccggcggtcggctttgccaccgatctgctggtgcgtgcgggcgccgccgtg
atgttctcggaagtcactgaagtgcgcgacggcatcgatcagctgacttcgcgcgcgatc
aacgaagaagtcgcgcaggccatgatccgcgagatggactggtacgacagttacctgcaa
aaaggcggcgtcgaccgcagcgccaacaccacgccgggcaacaagaagggcggcctcgcc
aacatcgtcgaaaaggccatgggctccatcgtcaagtcgggcagcgcgccgatttccggc
gtgctggcgccgggcgacaagctcaaacagaagggtctgatctacgccgccacaccggcc
agcgatttcgtctgcggcaccttgcagctggccgccggcatgaacctgcatatcttcacc
accggccgcggtacgccatacggcctggctgcggtgccggtgatcaaggtcgccacgcgc
aacgatctggcacggcgctggcatgacctgatggacgtcaatgccggccgcatcgccagc
ggtgaggcaaccattgccgacgtcggctgggagctgttccagctgatgctggatgtggcc
agcggccgcaagcagacctgggccgagaagtggaaattgcataacgcgctgacgctgttc
aacccggcgccgatcacctga
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