Herbaspirillum hiltneri: F506_10715
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Entry
F506_10715 CDS
T04039
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hht03009
]
F506_10715 (rimO)
Enzymes [BR:
hht01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
F506_10715 (rimO)
Ribosome biogenesis [BR:
hht03009
]
Prokaryotic type
ribosomal protein modification factors
F506_10715 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
DUF2249
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AKZ63080
LinkDB
All DBs
Position
2347067..2348443
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AA seq
458 aa
AA seq
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MSNASPVVPQVAPKVGFVSLGCPKALVDSEQILTQLRAEGYDTAKSYDGADLVIVNTCGF
IDAAVQESLDAIGEALSENGKVIVTGCLGAKKDGDGDDLIQKIHPKVLEVTGPHAVGEVM
LAVHKHLPKPHAPFLDLVPAQGVKLTPKHFAYLKISEGCNHRCSFCIIPSMRGDLVSRPI
ADVMLEAENLFKAGVKELLVISQDTSAYGVDVKFRMGFWNGKPVKTHMTQLVEALGELAS
RYGAWVRLHYVYPYPHVDQIIPFMAQGHVLPYLDVPLQHAHPDVLKRMKRPASGEKNIER
IQAWRKMCPDLTIRSTFIAGFPGETEAEFEYLLDFLKEAEIDRLGCFAYSPVEGATANLL
DNPVPEELREERRGRVMQLQEEISKKRLQAKVGKTLRVLIDEVDRSGGIGRSSADAPEID
GVVYVKPPFEPHKKLVVGEFVDVVVTAADAHDLWAAAQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatgcttctcccgtcgttccccaggtagcccccaaggtcggcttcgtttcactc
ggctgccccaaggcgctggtggactccgaacaaatcctcacgcaattgcgcgccgaaggt
tacgataccgccaagtcctatgatggcgccgatctggtcatcgtcaatacctgcggcttc
attgatgccgccgtgcaagagtcgctggatgcgatcggcgaggcgctgagcgaaaacggc
aaagtcatcgtcaccggttgccttggcgccaagaaggacggcgacggcgacgacctgatc
cagaaaatccatcccaaggtgcttgaggtcaccggcccgcacgcggtcggcgaagtcatg
ctggcggtgcacaagcatttgcccaagccgcatgcgccgttcctcgatctggtgccggcg
caaggcgtgaagctgacacccaagcattttgcttatctcaagatttccgaaggctgcaac
catcgctgcagcttctgcatcatcccttccatgcgtggcgacctggtgtcgcgcccgatt
gcggacgtcatgctggaagccgaaaacctgttcaaggccggagtcaaggaattgctggtc
atttcgcaagacaccagcgcctatggcgttgacgtcaaattccgcatgggattctggaat
ggcaagccggtcaagacacacatgacgcaactggttgaggcgctcggcgaactggccagc
cgttatggcgcctgggtgcgcctgcattacgtctacccgtatccgcacgtggaccagatc
atcccgttcatggcgcagggccatgtgctgccgtacctcgacgtgccgctgcagcatgcc
catcccgacgtgctcaagcgcatgaaacgtccggccagcggcgagaagaacattgaacgc
atccaggcctggcgcaagatgtgccccgacctgaccatccgctcgactttcatcgccggt
ttcccaggcgaaaccgaagccgagttcgaatacctgctcgacttcctcaaggaagccgaa
atcgatcgcctgggctgctttgcctattcccccgtggaaggcgcgaccgcaaatctgctc
gacaacccggtgccggaagagctccgcgaagagcgccggggacgcgtcatgcaactgcag
gaagagatttccaagaagcgcctgcaagccaaagtcgggaaaaccttgcgtgtactgatc
gacgaggtggatcgtagcggcggcatcggacgctcctccgccgatgcgcctgaaatcgac
ggcgtggtctacgtcaagccgccgttcgaaccgcataaaaaactcgtggtcggcgagttc
gtcgatgtcgtcgtcactgctgccgacgcgcacgatttgtgggcggcggcgcaatga
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