Hermetia illucens (black soldier fly): 119655354
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Entry
119655354 CDS
T08287
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
his
Hermetia illucens (black soldier fly)
Pathway
his03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
his00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119655354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
his03021
]
119655354
Enzymes [BR:
his01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119655354
Transcription machinery [BR:
his03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119655354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
HTH_Tnp_Tc3_2
Motif
Other DBs
NCBI-GeneID:
119655354
NCBI-ProteinID:
XP_037917133
EnsemblRapid:
LOC119655354
LinkDB
All DBs
Position
4:complement(83002555..83028980)
Genome browser
AA seq
1641 aa
AA seq
DB search
MSASWREIDLYPTDLQFSVFTSEDVKKLSVLKVITGLTFDSLGRALPGGLYDPVMGAHGK
SMEPCQTCFSISYCPGHFGHIELNALVYNPFFVKLIHDILKISCLDCHRLQFKDHFQQIL
STQLDLVDAGHITEAQELEVFKSEVVFGSQESSQQVENVDTLHPKIQEMRKLLEEGSASV
QKTKTNCAIRSAIVNSALQRKPGQKCLYCQNVLKKVRYSFKKLVISITKGERQALKEQNM
IQADNNVSNKVILADECREYLRQIYSNAPELLRKLFPVLNSYPENVKFPMDCFFMDVVIV
TPPKARPTNVLRDEILEHPQTILYKNIIESNSVLRLVLLNLKNTAENLKPESKALYESAR
GSTPYEKMYYAWQDLQVNIDQLLDVSGTRDKLRAQGLKQLLEKKEGLIRKHMMGKRVNFA
ARTVITPDPNINVEEVGVPDLFAKKLSYPVPVTSWNISQLRKMVINGPNIHPGANYIEDE
KGHKMVIPADNASKRESMAKLLLTKPENGVKTVHRHLLNGDILLFNRQPSLHKPSIMAHK
ARILQGEKTFRLHYSNCKAYNADFDGDEMNAHFPQSEVARSEAYNIVNVPNQYLVPKDGT
PLGGLIQDHVISGVKLSIRGRFFNREDYHQLVYQGLSHLKGNIKLLPPTILKPFRLWSGK
QVISTIIMNIIPDGNPAINLTSNAKIGAKIWQTENSHTTIYGGTPLQGNDMTESEVRIRK
GELLVGVLDKQQYGATPYGLIHCMYELYGGDCSTRLLTSFTKLFTYFLQREGFTLGVHDI
LITAEADESRRKIIKECRQVGNSIAAEALDLDPDISPEILAEKMNEAYKENPRFRVLLDR
KYKSVLDNYTNNINKTCLPAGLTCKFPENNLQLMVLSGAKGSMVNTMQISCLLGQIELEG
KRPPLMISGKSLPSFPKFETSPRSGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTS
RSGYLQRCLIKHLEGLSVGYDLTVRDSDNCVVQFLYGEDGLDVCKSQFLNMKNMKFLDEN
LDVIKHATSEDDKEIDQKLRKYHKKLRSWRKKNRDIANKQRISSFQQFSAELRTEIEVEN
PRKLNRKTGRLKIDEKIIALWKKADVEQKESYSKRYSKCPDPCNSKFKPDSFYGAVSEYL
ENLMENYTVKEPTRKDEIRDILYTKGIRSIAAPGEPVGSLAAQSIGEPSTQMTLNTFHFA
GRGEMNVTLGIPRLREILMLASVNIKTPSMDIPFKPNQEKNAEKLRIKLNRVTLADVLEH
VNYMHQLVLQPERSYQYQIYFKFLPREAYAEDFCVKPKQIIKYVSQTFIKLMFRAIGRSA
KSKHTVVEIGDKESKGDNAQDDDDRDVEGTNNEPNAEINDSSDDELATGEDDATGIKLKT
KKQDELEYDEPEVEEEQMDADGAEEDDALDDQDSSQEDHSEEMNANDLFESVMSNKMVND
YEYDRVNYLWCKITFNLPIKYKKIDISNIIREVAKKAVIHEVENIKRAITYTNNSDITLK
TDGINIVEMFKYNKILDLNRLYTNDVHAVAKTYGIEAAARVIVKEVKNVFQVYGITVNPR
HLLLIADYMTFDGTFKPLSRKGMEYSSSPLQQMSFESCLQFLKSATILGKEDDLGSPSGR
LMVGLPIKSGTGAFSLMTKIC
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcgtggcgtgaaattgatttatatccaacggatttgcagttttctgtgttc
acttcggaggatgtgaaaaagttgagtgttttgaaagtcattaccgggctaactttcgac
agcctgggtagagccttacctggcggattatatgatcctgtgatgggggctcatggcaag
tcaatggaaccctgtcagacttgcttctccatatcatactgcccaggtcactttggacat
atcgaactcaatgcgttagtgtataatccatttttcgtcaaactcatccacgacatcttg
aagatttcttgtttggattgccaccgactgcaatttaaagatcattttcagcaaattctt
tcgactcaactagacctggtggacgctggacatattacggaggcacaagaattagaagtg
ttcaagtcggaagtggtttttggcagtcaggaaagtagtcaacaagtagaaaatgtggat
acacttcatccgaaaatacaggaaatgcggaagctgttggaagaaggatccgcatcggtg
cagaaaaccaaaaccaactgcgcaattcgttcagctatagtgaattcggctttacaaagg
aaacctggtcagaaatgcctatattgtcaaaatgtgttgaagaaggtccgttattccttt
aagaaactcgtcatttccataacgaaaggagaaaggcaggccttgaaggaacagaacatg
attcaagcagacaacaatgtttcaaataaagttatcttggcagatgaatgtcgcgaatat
ttacggcagatctattcaaatgcacctgaactattgaggaaactgttcccggttctcaac
agttatccggaaaacgtaaagttcccgatggattgtttttttatggatgtggtcatagta
acgccaccaaaagctcgaccaacgaacgtgttgcgtgacgaaattttggagcatcctcaa
acgattttatataaaaatataattgaatcgaattcagttttgcgtctggttttgttgaat
ttgaaaaatacggctgaaaatctgaaacctgaatctaaggctctgtatgaatctgcacgt
ggatcaaccccctatgagaaaatgtattatgcatggcaggatcttcaagtaaacattgat
caactgttagatgttagtggtacaagagacaaattacgagcgcaaggactgaaacagcta
ctcgagaaaaaagaaggtttaattcgtaaacatatgatgggtaaacgtgtaaacttcgca
gcgcgaacagttattactcccgatccaaatataaatgttgaagaagtaggtgttcctgat
ctctttgccaagaaactttcctaccctgtaccggttacatcgtggaatatatcccagctt
cgtaaaatggtgattaatgggccaaacatacatcctggagctaattatatcgaagatgaa
aaaggtcataaaatggttattcctgccgataacgccagcaaacgtgaaagtatggcaaaa
ttacttttgacaaaaccagagaatggtgttaaaactgttcatcgccacttattgaatgga
gacattttgctattcaatcgtcagccaagccttcataaacccagtatcatggcacataag
gcgagaattcttcagggggagaagacattccgcttgcattattcgaattgcaaagcttat
aacgctgatttcgatggtgatgaaatgaacgcacattttcctcaaagtgaagtggcacga
agtgaagcttataacatagtaaatgtaccaaaccaatacttggtcccgaaagacggcacc
ccattaggcggtcttattcaagatcatgttatatctggtgtgaaactttcaattagaggg
agatttttcaacagagaagattatcatcaacttgtctatcaaggactttctcatttgaaa
ggaaacattaaattattgccaccgaccatactgaaaccgttcagattatggtctggaaaa
caagtcatatcaacaataataatgaacattatcccagatggcaatcctgcgatcaattta
acttccaatgcaaaaataggtgcaaaaatttggcaaacagaaaacagtcatacaacaatt
tatggcggtactcctctgcaaggcaatgacatgactgaatcagaggtgaggattcgcaaa
ggggagctacttgttggcgtattggacaaacaacagtatggagcaacgccctatggtctt
atacactgcatgtatgagctatacggcggcgattgctccacgcgcttattgacgtcattc
acaaaactttttacgtattttctacaacgcgaaggattcacgcttggtgtgcacgatatt
ctgataacagctgaggcagatgaaagtcgtcgaaaaattatcaaggaatgtcgccaagtg
ggaaactctattgctgcagaagcgctagatctcgatccagatatttcacccgagattctt
gctgaaaagatgaatgaagcatacaaggagaatccaagatttcgcgtgttattagatagg
aaatataagtccgttctagataactacacgaataacataaacaaaacttgcttacctgca
gggttaacgtgtaaattccctgaaaataatttacaactgatggtgttatctggtgctaaa
gggtcgatggttaatacaatgcaaatttcttgtttactcggtcaaatagaattggaagga
aagcgtccaccgctcatgatttcgggaaaatcgttaccaagcttcccgaaattcgaaacg
tctcctcgatcaggtggtttcatagatggacgtttcatgacaggaatccagcctcaagaa
tttttcttccattgtatggcaggacgtgaaggtcttatcgatactgctgtaaaaacaagt
agatctggttacctacagcgctgcttaatcaagcatttggaaggtcttagtgtcggatat
gatcttacagttcgggacagtgataactgtgtagtgcagtttctctacggtgaagatggg
ttggatgtatgtaaatcacaatttctcaacatgaaaaatatgaaatttttggacgagaat
cttgatgtgattaaacatgcgactagcgaggacgacaaggagattgatcaaaagttgcgg
aagtatcataaaaagttaagatcttggcgaaaaaagaatcgtgatattgcaaataagcag
aggatttccagtttccagcaattttctgctgaacttcgtacagagatcgaggtggaaaat
cctcgaaagttaaataggaagactggtcgactaaagattgatgagaagattattgcatta
tggaaaaaagctgatgtcgaacagaaagaaagttattcgaaaagatatagtaaatgtccc
gatccctgtaattctaaatttaaaccggattcattttacggagcggtatcagaatactta
gagaatctaatggaaaattatacagtgaaagaacctacccgtaaagatgaaattagagat
atattatatacgaaaggcatacggtcaatagcagcacctggggagccagttggatcccta
gcagcgcaatcaatcggagaaccttccactcaaatgacactcaacactttccattttgct
gggagaggcgaaatgaacgttactttgggtattccacgtctcagggaaatcctaatgtta
gcttctgtgaatataaaaactccatcaatggatattccatttaaacctaatcaagaaaaa
aatgcggaaaaacttagaataaagttgaacagagttacactggctgatgttctagaacat
gttaactatatgcaccagttggttctacagccggagagatcataccaatatcagatatac
ttcaaatttctaccaagagaggcctacgctgaagatttctgtgtaaaaccgaaacagatc
ataaaatatgttagtcagacattcattaaattgatgtttagggctatcggtagatcagcg
aaaagtaaacatacagttgttgaaatcggtgacaaagaatctaaaggagataatgcgcaa
gacgacgatgatcgcgatgttgaaggcacaaataatgaaccaaatgccgaaataaatgac
tcttcagacgatgagcttgctacgggtgaagatgacgcgacggggataaaattgaaaact
aaaaagcaagatgaattggagtatgatgaacccgaagtagaagaagagcagatggatgct
gatggggccgaagaagatgacgcgctggatgatcaggacagcagtcaagaggatcattcc
gaagaaatgaatgcaaatgatttattcgaatcggtcatgagtaacaaaatggtgaatgat
tacgaatacgacagagtgaactatttgtggtgcaaaataactttcaatctacctataaag
tataagaagattgatatttccaacataatcagggaagttgcgaaaaaggcagtcattcac
gaagtagaaaatataaaacgagctattacgtacacaaacaatagtgacattactctgaag
acagatgggatcaacattgttgaaatgttcaaatacaataaaatattggatctaaatcga
ctctacacaaatgacgtccatgccgtagctaaaacctatggcattgaagcagcagccaga
gttattgtgaaagaagtaaagaatgtgtttcaagtgtatggtatcacggtgaatcctcgc
catttgctattgattgcggattatatgacgtttgatggtacattcaagccgttgagtcga
aaaggaatggaatattcgtcatcaccacttcagcaaatgtcattcgaatcctgtctccaa
ttcttgaaatcagcgacaatactgggcaaagaagatgatttgggctcgccttcgggaaga
cttatggttggtttacctattaaaagtggcacaggggcattctcactgatgaccaaaatt
tgttga
DBGET
integrated database retrieval system
