Halorubrum lacusprofundi: Hlac_2210
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Entry
Hlac_2210 CDS
T00856
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hla
Halorubrum lacusprofundi
Brite
KEGG Orthology (KO) [BR:
hla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hla03016
]
Hlac_2210
Enzymes [BR:
hla01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Hlac_2210
Transfer RNA biogenesis [BR:
hla03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Hlac_2210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
SPL
Motif
Other DBs
NCBI-ProteinID:
ACM57787
UniProt:
B9LRR3
LinkDB
All DBs
Position
1:2193098..2194402
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AA seq
434 aa
AA seq
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MATYHIETYGCSSNRGESREIERALRDGGHRPADGPEDADVAILNTCTVVEKTERNMLRR
AEELEDVTAELVVTGCMALAQGDAFREAGVDAEILHWDEVPSHVLNGECPTVTPDAEPVL
DGVVGILPIARGCMSNCSYCITKFATGRVDSPTVEENVEKARALVHAGAKEIRVTGQDTG
VYGWDNGDRKLPELLDRICDIDGDFRVRLGMANPGGIHGIHEELAEVFADNEELYDFIHA
PVQSGSDDVLEDMRRQHRVEKFREVVETFDDRLDHWTLSTDFIVGFPTETEADHERSMDL
LAEVRPEKINVTRFSKRPGTDAADMKGLGGTIKKERSKAMSELKMEVVGDAYESMVGETF
EVLVVEEGTGDSVKCRDGAYRQIIVQNAAERGVAVGDFLEVEVTGHNTVYAFGEPTDGGR
PVDEDPAESTPSSA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtatcacatcgaaacgtacggctgtagttccaaccggggcgagagccgggag
atagagcgggcgctacgcgacggcggccaccgcccggccgacggtcccgaagacgcggat
gtcgccatcctcaacacctgtacggtcgtcgagaaaacggagcggaacatgctccggcgc
gccgaggagctggaagacgtaaccgcagagctcgtcgtcaccggctgcatggcgctcgcg
cagggcgacgctttccgcgaggccggcgtcgacgccgagatcctccactgggacgaggtg
ccctcgcacgtgctcaacggcgagtgcccgacggtcaccccagacgccgagcccgtctta
gacggcgtcgtcggtatcctccccatcgcgcgcggctgcatgagcaactgctcgtactgt
atcacgaagttcgcgaccggtcgggtcgattctcccactgtcgaagagaacgtcgagaag
gcccgcgcgctggtccacgccggcgccaaggagattcgggtgaccggacaggacaccggg
gtctacggctgggacaacggcgatcggaagctgccggagctgctcgaccggatctgcgac
atcgacggtgacttccgagttcgactcgggatggccaaccccggcggtatccacggcatc
cacgaggagctggccgaggtgttcgccgacaacgaggagctgtacgacttcatccacgca
ccggtccagtccggctccgacgacgtactcgaagacatgcgccgccagcaccgcgtcgag
aagttccgcgaggtcgtggagaccttcgacgaccggctcgaccactggacactgtcgacc
gacttcatcgtcggcttcccgaccgagaccgaggccgaccacgagcgctcgatggacctg
ctcgccgaggtccgcccggagaagatcaacgtcacccgcttctcgaagcgccccggtacc
gacgccgccgacatgaaggggctcggcgggacgatcaagaaggagcgctcgaaggcgatg
tccgagctgaagatggaggtcgtcggcgacgcctacgagtcgatggtcggcgagaccttc
gaggtcctcgtcgtcgaggagggcaccggcgactccgtgaagtgtcgcgacggcgcttac
cggcaaattatcgtccagaacgcggcggagcgcggcgtcgcagtgggtgacttcctggag
gtggaggtgaccggtcacaacaccgtctacgcgttcggcgagccgactgatggcggtcga
cccgtcgacgaggaccccgccgagtcgaccccgtcgtcggcgtaa
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