Halobiforma lacisalsi: CHINAEXTREME04010
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Entry
CHINAEXTREME04010 CDS
T04669
Name
(GenBank) DNA polymerase II large subunit, intein-containing
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
hlc
Halobiforma lacisalsi
Pathway
hlc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHINAEXTREME04010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hlc03032
]
CHINAEXTREME04010
Enzymes [BR:
hlc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHINAEXTREME04010
DNA replication proteins [BR:
hlc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
CHINAEXTREME04010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolC_DP2
LAGLIDADG_3
Intein_splicing
Phage_CI_repr
HTH_23
HTH_17
YdaS_toxin
Terminase_5
Phage_terminase
HTH_28
HTH_3
HTH_50
HTH_22
Motif
Other DBs
NCBI-ProteinID:
APW96985
UniProt:
M0LQH4
LinkDB
All DBs
Position
complement(853692..858821)
Genome browser
AA seq
1709 aa
AA seq
DB search
MREEDERYFERLESQLEEAFDVAETAKERGADPEPEVEIPTARDMADRVENILGIDGVAE
RVRELEGEMSREEAALELAKDFAEGRVGDYETKAGKVEGAVRTAVALLTEGVVAAPIEGI
DKVEILANDDGTEFVNVYYAGPIRSAGGTAQALSVLVADYTRALVGIDQYKARDEEIERY
AEEIALYDKETGLQYTPKDKETKFIAEHMPIMLDGEATGDEEVSGFRDLERVDTNSARGG
MCLVLAEGIALKAPKIQRYTRNLEEVDWPWLQDLIDGTYYDDAGDEEGADEEDAADGEEE
DAEADDEASEPDEPEGPPRVDESKKFLRDLIAGRPVFSHPCAEGGFRLRYGRARNHGFAT
AGVHPAAMHLVDDFLATGTQIKTERPGKAAGVVPVDSIEGPTVKLANGDVRRIDDPEEAK
EIRNGVEKILDLGEYLVNYGEFVENNHPLAPASYTYEWWVQDLAAAGADVQAFEDDPRID
LEFPDPEEALEWATEHDAPLHPEYTYLWHDLSVAAFCNLADAVAEGRIEGDGDGSVNGNG
DDSILVLEYADDVADALETIVLEHRQRPGDDRIEIDDWRPFVRSLGCKPRRAVADGAALE
PEVDDEGAGEPAVELERTWSEDDLSERARTWGQEDGENAIEAVNEVAPFEVRERAPTRIG
NRMGRPEKSERRDLSPPVHTLFPIGEAGGSQRNVADAAKHAETMSDTPGVVELQVGRQRC
PNCETETFKNRCPDCNERTEPDYRCPDCDQSLEPDEAGRVECDRCEIEGTCVETREVDVN
EEFRSALESVGERENAFDILKGVKGLSSTNKIPEPMEKGILRAKHDVSAFKDGTVRYDMT
DLPVTSVRASELDVDVGQLQALGYEEDIHGEPLTHEDQLVELKVQDIVLSDGAAEHMMQT
ADFIDDLLEQYYGLEPFYELEDRQDLVGELVFGMAPHTSAATVGRVIGFTSAAVGYAHPY
FHAAKRRNCFHPETKIWYQNKDGERAYESIEAIVEDRLTDPETDDFGTVVQDVDGISVPS
VTEDGTPVERPVEAVSKHPAPDHLVRVETRSGRTLTVTPDHTFRRWTPAGLESVDARELS
AGDELPSPKSLGFEGESKSIDLLEAFIEADSIPNDSLVVRGLGSDRIKNLLDDATPEQAY
LKPVADRLGVSQSTVYNWVNRDSVPFGPLLSLFDAAELLERIPDDVTLGMKRDTAAIQRR
FEIDESVATVLGYYAAEGFTRREDGSFYQTTICTPDEAARNEIIETFDDALSVDAFEENE
WKVTVSSRLVSALFADVLELGATAETKRIPDYVLDSPRSQLQAFLAAYFSGDGSPASDRI
EIRAHTISDDLAADLVAALKRFGIAATTYRETRQPSTGAVAEFYDDEPVPEFESWVLKIT
SENAARFAERIGFHLERKQETITEVLETTECRTQRLFADGGKTWLDEVVSVEIVESDIEY
TYCLTVEDTNTLVANDIYVGQCDGDEDCVMLLLDGLLNFSKSFLPDKRGGKMDAPLVMSS
RIDPSEIDDEAHNMDIVSQYPREFYEATREQADPEAVDIQIGEDTLGTDGEYTGFEHTHD
TTDIAMGPDLSAYKTLGSMMEKMDAQLELSRKLEAVDETDVAERVIEYHFLPDLIGNLRA
FSRQETRCLDCGEKFRRMPLTGDCRECGGQVNLTVHQGSVNKYMQTAIQVAEEYDCRPYT
KQRLEVLEKSLESIFENDKNKQSGIEDFM
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggaagacgaacggtacttcgagcggctcgagtcccagctcgaggaggccttc
gacgtcgccgagacggcgaaggaacgcggcgcggatcccgaacccgaagtcgagatcccg
acggcgcgggacatggccgaccgcgtcgagaacatcctggggatcgacggcgtcgccgag
cgggtgcgggaactcgagggtgaaatgtcccgcgaggaagccgccctcgaactcgcgaag
gacttcgccgagggccgcgtcggcgactacgagacgaaagccggcaaggtcgagggggcc
gttcggacggcggtcgccctgctgaccgagggcgtcgtcgcggcaccgatcgaggggatc
gacaaggtcgaaatcctcgcgaacgacgacgggacggagttcgtcaacgtctactacgcc
gggccgatccgctctgcgggggggactgcccaggcgctgtccgtgctggtcgccgactac
acgcgcgcgctcgtcggtatcgatcagtacaaggcccgcgacgaggagatcgaacgctac
gcagaggagatcgccctctacgacaaggagaccggcctccagtacacgcccaaagacaag
gagacgaagttcatcgccgagcacatgccgatcatgctcgacggcgaggcgacgggcgac
gaggaggtctccggcttccgcgatctcgagcgtgtcgacaccaacagcgcccgcggcggg
atgtgtctggtgctcgcggaggggatcgcgctgaaggccccgaagatccagcgctacacc
cggaacctcgaggaggtcgactggccgtggctccaggacctgatcgacggcacctactac
gacgacgcgggcgacgaggaaggggccgacgaggaggacgctgccgacggcgaggaggaa
gacgccgaagccgacgatgaggcgtccgaaccggacgaacccgaggggccgccgcgcgtc
gacgaatcgaagaagttcctccgggacctgatcgccggccggccggtcttctcccatccc
tgcgcggagggcgggttccgtctgcgatacggacgcgctcgcaaccacggtttcgcgacg
gccggcgtccaccccgccgcgatgcacctggtcgacgacttcctggcgaccgggacccag
atcaagaccgaacggcccgggaaggcggccggcgtcgtccccgtcgactccatcgaggga
ccgacggtcaaactcgcgaacggcgacgtgcgacggatcgacgaccccgaggaagcgaag
gagatcagaaacggcgtcgagaagatcttagacctcggcgagtacctggtcaactacggg
gagttcgtcgagaacaaccacccgctggcccccgcctcctacacctatgagtggtgggtc
caggacctcgcggccgccggcgcggacgtccaggcgttcgaggacgacccccggatcgac
ctcgagttccccgaccccgaggaggccctcgagtgggccaccgaacacgacgcgccgtta
caccccgagtacacctacctctggcacgacctctcggtagccgccttctgtaacctcgcc
gacgccgtcgccgagggtcggatcgagggggacggcgacggcagcgtgaacgggaacggg
gacgacagcatcctcgtcctcgagtacgccgacgacgtcgcggacgcgctcgagacgatc
gttctcgagcaccgccagcgtccgggcgacgaccgcatcgagatcgacgactggcggccg
ttcgtccgctcgctcggctgtaaaccccggcgggcggtcgccgacggcgcggccctcgaa
cccgaggtcgacgatgagggcgccggggaaccggcagtcgaactcgagcgtacctggagc
gaggacgatctctccgagcgcgcccgaacctgggggcaggaggacggcgaaaacgccatc
gaggcggtcaacgaggtcgctccgttcgaggtacgggaacgcgcgcccacccggatcggc
aaccggatgggccggcccgagaagtccgagcgccgggacctgagccccccggtccacacg
ctcttcccgatcggcgaagccggcggttcccagcgcaacgtcgccgatgcggccaaacac
gccgagacgatgtccgacacgcccggcgtcgtcgaactgcaggtcggacgccagcggtgt
ccgaactgcgagacggagacgttcaagaaccgctgtcccgactgcaacgagcggaccgag
cccgactatcgctgtccggactgcgaccagtcgctcgaaccggacgaagccggccgcgtc
gagtgtgaccgctgcgagatcgagggcacctgcgtcgaaacgcgcgaggtcgacgtcaac
gaggagttccggtcggcgctcgagtcggtcggcgaacgggagaacgccttcgacatcctg
aaaggggtcaaaggactgtcctcgacgaacaagatccccgaaccgatggagaagggtatt
ctccgggcgaaacacgacgtctcggcgttcaaagacggtaccgtccgctacgacatgacg
gacctccccgtgacgtcggtccgggcgagcgaactcgacgtcgacgtcggccaactgcag
gcgctgggctacgaggaggacatccacggcgaaccgctgacccacgaggaccagctcgtg
gagctgaaagtccaggacatcgtcctctccgacggcgcggccgagcacatgatgcagacg
gccgacttcatcgacgacctcctcgagcagtactacgggctcgagcccttctacgaactc
gaggaccgtcaggatctggtcggcgaactggtgttcgggatggcaccacacacgagcgca
gctactgtcggaagagtaattggatttacaagcgctgcggttggatatgctcatccgtac
tttcacgccgcgaaacggaggaattgcttccatccggagacgaaaatctggtatcagaac
aaagacggcgaacgggcgtacgaatcgatcgaagcgatcgtcgaagaccggttgaccgat
cccgaaacggacgatttcggaacggtcgttcaggatgttgacgggatcagcgttccgtcc
gtcacggaagacgggacgcccgtggaacgccccgtcgaagccgtttcgaaacatccggca
cctgaccacctcgttcgcgtcgaaacgcggagcggccgaacgctgaccgtaactcccgat
cacacgttccgacggtggactcccgcaggcctcgagtcggtcgacgctcgagaactctct
gccggtgacgaactcccgagtccgaaatcgctcggattcgagggagagtcgaaatcgatc
gaccttctagaagcgtttatcgaggcggattcgatcccgaacgactcgctcgtcgttcgc
ggactcggctccgatcggatcaagaatctcctcgacgacgcgacgccggagcaggcatat
ctcaaaccggttgcggaccgactcggcgtctctcaatcgacggtctacaactgggtgaac
cgagatagcgttccgttcggtccgctcctctctctgttcgacgctgcggaactcctcgag
cggattccggacgacgtcacgctcgggatgaaacgcgatacggcggccatacagcggcgg
ttcgagatcgacgagtccgtcgcgacggtgctcggatactacgccgccgaaggattcact
cgacgggaagacgggtcgttctatcagacgacgatctgtacgcccgacgaggcggcccgc
aacgagatcatcgagacgttcgacgacgccctgtcggtcgacgccttcgaagagaacgag
tggaaggtgacggtctcgagccgactcgtctcggcgctgtttgcggacgtactcgaactc
ggagcgaccgcggaaacgaaacggattcccgactacgtcctcgatagtccgcgctctcag
ctgcaagcgttcctggccgcgtacttcagcggcgacgggagtcccgcgagcgatcgaatc
gaaattcgggcacacactatcagcgacgatcttgcggcggatctggtcgctgccctgaaa
cggttcggaatcgcggcgacgacctatcgtgaaacgcgacagccgtcgaccggagcggtc
gccgagttctacgacgacgaaccggttcccgagttcgaatcgtgggttctcaagatcacg
tccgagaacgcggctcggttcgccgagcgaatcggtttccacctcgagcggaagcaggaa
accatcaccgaggttctcgagacgacggagtgtcgcacacagcggctgttcgccgatggc
ggcaaaacgtggctcgacgaggtcgtttcggtcgagatcgtcgagagcgatatcgagtac
acgtactgtctcaccgtcgaagacacgaacacgctcgtggccaacgatatctatgtcggt
cagtgcgacggtgacgaggactgcgtaatgttgcttctcgacggacttctcaacttcagt
aagtctttcttgccggacaagcgcgggggcaagatggacgcgcccctcgtcatgtcctcc
cgcatcgacccctccgagatcgacgacgaggcccacaacatggacatcgtctcgcagtac
ccccgggagttctacgaggccactcgcgaacaggccgatcccgaggcggtcgacatccag
atcggcgaggacacgctcggtaccgacggcgagtacaccggcttcgagcacacccacgac
accaccgacatcgcgatggggccagacctctcggcgtacaagacgctcggctcgatgatg
gagaagatggacgctcaactcgagctctcgcggaaactcgaggccgtcgacgagaccgac
gtcgccgagcgggtcatcgagtatcacttcctgccggacctgatcggaaacctgcgggcc
ttctcgcgccaggagacccggtgtctcgactgcggcgagaagttcaggcggatgcccctg
accggggactgccgggagtgtggcggccaggtcaacctcaccgtccaccagggttccgtg
aacaagtacatgcagacggcgatccaggtcgccgaggagtacgactgtcggccctacacg
aaacagcgcctcgaagtgctcgagaagtccctcgagagcatcttcgagaacgacaagaac
aagcagtcgggtatcgaggacttcatgtga
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