Halobiforma lacisalsi: CHINAEXTREME11245
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Entry
CHINAEXTREME11245 CDS
T04669
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hlc
Halobiforma lacisalsi
Pathway
hlc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHINAEXTREME11245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlc03021
]
CHINAEXTREME11245
Enzymes [BR:
hlc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHINAEXTREME11245
Transcription machinery [BR:
hlc03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CHINAEXTREME11245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Thioredoxin_14
Motif
Other DBs
NCBI-ProteinID:
APW98332
UniProt:
M0L661
LinkDB
All DBs
Position
2339136..2339885
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AA seq
249 aa
AA seq
DB search
MSEEYDVEFVEHGEREARFLVRGISPGFANGIRRAMVADVPTMAIDTVRFIENSSVMFDE
QLALRLGLVPLTTPPEGEFGEDDTVTLSIDVEGPATAYSGDLVSEDDLVQPADENVPIIE
LKEDQRLEAEADAVLDHGKDHAKHQGGVAIGYRHLQRVEVVGDLPEFEDEESRIVRGVIE
DDGELVPTSEFDHDLSNRYPGKEVEVEDVPNAFVFHVETDGSLDVEELVTRAADSIEARA
TDLEEAVQL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagtacgacgtcgagttcgtcgaacacggggaacgcgaagcgcgcttcctc
gtccgcgggatctcgcccggattcgccaacggcatccgtcgtgcgatggtcgccgacgtg
ccgacgatggcgatcgataccgtccggttcatcgagaactcgtcggtcatgttcgacgag
caactcgccctgcgactcgggctcgtcccgctgacgacccctcctgaaggggagttcggc
gaggacgacaccgtcacgctctcgatcgacgtcgaagggccggccaccgcctactcgggc
gacctcgtctccgaggacgacctcgtccagcccgcggacgagaacgtcccgatcatcgag
ctcaaggaagaccagcggctcgaggccgaagccgacgccgtgctcgaccacgggaaagac
cacgccaaacaccagggcggggtcgcgatcggctaccgacacctccagcgcgtggaggtc
gtcggcgacctgccggagttcgaggacgaggagagtcggatcgtccgcggcgtcatcgag
gacgacggcgagctcgttcccaccagcgaattcgaccacgacctctcgaaccggtatccg
ggcaaggaggtcgaggtcgaggacgtcccgaacgccttcgtcttccacgtggagacggac
ggctcgctcgacgtcgaggagctggtgacgcgagccgccgactcgatcgaggcgcgcgcg
accgatctcgaagaagccgtacagctataa
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