Haloferax lucentense: SVXHx_1822
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Entry
SVXHx_1822 CDS
T08885
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hln
Haloferax lucentense
Pathway
hln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVXHx_1822 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hln03021
]
SVXHx_1822 (rpoD)
Enzymes [BR:
hln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVXHx_1822 (rpoD)
Transcription machinery [BR:
hln03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SVXHx_1822 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
DUF5978
DUF4198
Motif
Other DBs
NCBI-ProteinID:
WEL26118
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All DBs
Position
1711704..1712483
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AA seq
259 aa
AA seq
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MVNDFQVEFIEREDRRARFVARGLTPALANGIRRAMVADVPTFSIDTVRFVENTSVMFDE
MIGLRLGLVPLTTPLDDFEPGDTVTVALEVDGPATAYSGDIESADDMVVPADENIPIIEL
KEGQRLEFEADAVLGYGKDHAKNQGGVAVGYRHLQRVEVVGDAGEFDEQEPNILRGVIEE
AAAEHAEGDAEDGDLVATETFGNDLTERYPGKEVEVHDVPGAFVFSVETDGSFDVDELVT
RAVASLGDRAAELEEKVAL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacgacttccaggtcgagttcatcgaacgcgaagaccgacgcgcccgtttcgtc
gcgcgcggtctgaccccggcgctagccaacggcattcgccgggcgatggtcgccgacgtg
ccgacgttctccatcgacaccgttcggttcgtggagaacacctcggtcatgttcgacgag
atgatcgggcttcgtctcggtctggttccgttgaccacgcctctcgacgacttcgaaccc
ggtgacaccgtcaccgtcgcgctcgaagtcgacgggccggcaaccgcctactccggggat
atcgaatccgcggacgacatggtcgtcccggcggacgagaacatccccatcatcgagctg
aaggagggccagcgcctcgagttcgaggccgacgccgtcctcggctacggaaaagaccac
gccaagaaccaaggcggggtcgccgtcggctaccgacacctccagcgcgtggaggtcgtc
ggcgacgccggcgagttcgatgaacaggagccgaacatcctccgcggcgtcatcgaagag
gccgcggcggagcacgccgagggggacgccgaagacggcgacctcgtcgcgacggagacg
ttcggcaacgacctgacggagcggtaccccggaaaagaggtcgaagtacacgacgtgccc
ggcgcgttcgtcttcagtgtggagacggacgggtcgttcgacgtcgacgagctcgtgacg
cgcgccgtcgcctccttgggtgaccgcgcggccgaactcgaagagaaggtcgcactgtaa
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