Hydrogenovibrio marinus: HVMH_1755
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Entry
HVMH_1755 CDS
T06677
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hmar
Hydrogenovibrio marinus
Pathway
hmar00540
Lipopolysaccharide biosynthesis
hmar01100
Metabolic pathways
hmar01250
Biosynthesis of nucleotide sugars
Module
hmar_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HVMH_1755 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hmar01005
]
HVMH_1755 (rfaD)
Enzymes [BR:
hmar01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HVMH_1755 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hmar01005
]
Core region
HVMH_1755 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
BBN60161
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Position
complement(1869352..1870320)
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AA seq
322 aa
AA seq
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MIVVTGGAGFIGSNIVKALNEQGIADILVVDNLKNGKKFINLADCDFADFLDKEDFQTRI
FAEEGLPEIECVFHQGACSATTEWDGKFMMDNNYEYSKDLLNFCLNRKIPFLYASSASVY
GDGPTFIEKREYEKPLNVYGFSKFQFDQYIRRVLPHAESQVVGFRYFNVYGPREQHKGDM
ASVAFKLHNQILKGEKLKLFGPYDGYDAGMQTRDFVYVEDVVKVNLWFKDNPDKSGVFNL
GPAAAEPFKNIAEAVIQFHGKGEIEYIPFPEHLKGAYQSYTQADNSLLREAGYTGEFHTV
AEGVHKYLTWLSENPTTLNFTK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgattgtagtaacaggcggtgccggatttattggttctaatatcgttaaggctttgaat
gagcagggtattgccgatatcttagtggttgataatttaaaaaatggtaaaaaattcatt
aatttagctgattgtgattttgctgattttttagataaagaagattttcagacgcgaatt
tttgccgaagaaggtctgcctgaaattgaatgtgtttttcaccaaggtgcttgttcagcc
actacggagtgggacggtaagttcatgatggataacaattatgaatattccaaagatttg
ctgaacttctgtttgaacagaaaaatcccttttctttatgcctcatcagcctctgtgtat
ggcgatggaccgacgtttatagaaaaacgtgagtatgaaaagccgctgaatgtttatgga
ttctccaagtttcaatttgaccaatatatccgtagagttcttcctcatgcagaaagtcag
gttgttggctttagatacttcaatgtatatggtccgagagaacagcacaaaggggatatg
gcgagtgttgcattcaaactgcataatcaaatcttaaagggcgaaaagctcaaacttttt
ggtccgtatgatggctatgatgctgggatgcagacgcgagattttgtctatgttgaagat
gttgttaaagtcaacttgtggtttaaagataacccggataagtcaggggtattcaactta
gggccagcggcagcggaaccttttaaaaacatagcagaagctgtgattcagtttcatggt
aagggtgagattgagtacattccttttccagaacaccttaaaggtgcataccaaagctat
actcaagctgataatagcttgctgcgagaagcaggttataccggagaatttcacacagtt
gccgaaggtgttcataaatatctaacttggttgagtgaaaatccgacaacactgaatttt
actaaataa
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