Hyphomicrobium sp. MC1: HYPMC_0025
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Entry
HYPMC_0025 CDS
T01557
Symbol
argD
Name
(GenBank) succinylornithine transaminase, also has acetylornitine transaminase activity, PLP-dependent
KO
K00821
acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:
2.6.1.11
2.6.1.17
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00220
Arginine biosynthesis
hmc00300
Lysine biosynthesis
hmc01100
Metabolic pathways
hmc01110
Biosynthesis of secondary metabolites
hmc01120
Microbial metabolism in diverse environments
hmc01210
2-Oxocarboxylic acid metabolism
hmc01230
Biosynthesis of amino acids
Module
hmc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
hmc_M00028
Ornithine biosynthesis, glutamate => ornithine
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HYPMC_0025 (argD)
00220 Arginine biosynthesis
HYPMC_0025 (argD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hmc01007
]
HYPMC_0025 (argD)
Enzymes [BR:
hmc01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.11 acetylornithine transaminase
HYPMC_0025 (argD)
2.6.1.17 succinyldiaminopimelate transaminase
HYPMC_0025 (argD)
Amino acid related enzymes [BR:
hmc01007
]
Aminotransferase (transaminase)
Class III
HYPMC_0025 (argD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CCB63266
UniProt:
F8J4U5
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All DBs
Position
22416..23672
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AA seq
418 aa
AA seq
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MGSSSAALGKAPRSASDTAVSSGPSSAVMGTYARQDVVFVRGEGCWLTSDTGERYLDFGS
GVAVNALGHAHPQLVAALKAQAEKLWHTSNLYRVEGQETVAEKLTRLTFAETVFFCNSGA
EACEGAIKVARRYHYVSGQPERQRIIAFRGAFHGRTLATLAAAGNEKYLEGFGPTVEGFD
HVDLGDVAAVEAAIGPETAAIMLEPIQGEGGVRTATPEFLKAVRELCDKHGVLLVLDEVQ
TGMGRTGKLFAHEWAGITPDVMAVAKGFGGGFPVGAVLATAEAAKGMTPGTHGSTFGGNP
LGMVVASTVIDIVSEPDFLEAVRDKTLRLKQGLEGLKDQHADLIEEVRGAGLLMGLKLKS
HVTPPQVVKAANAEKLLLVGAGDNCVRVLPPLIATDQDISDGLLALSRALGRVAGETS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttcctctgctgcgttggggaaagctccccgtagcgcttcagacacagctgtt
tccagcggcccatcgtccgctgtgatgggtacatatgcccgccaggacgtcgtcttcgtc
cgtggcgagggctgctggctgacatccgataccggagagcgctatctcgatttcggctcc
ggcgttgccgtcaacgcgctggggcatgcgcatccgcaactcgtcgcggcgctgaaagcc
caggcggaaaagctctggcatacgtcgaacctttatcgcgtcgaaggccaggagacggtc
gccgagaagctgacgcggctgacgttcgccgaaacggttttcttctgcaattccggggcg
gaagcgtgcgaaggcgcgatcaaggtggcgcgccgctatcattatgtttccggccagccc
gaacggcagcggatcattgcgttccgcggcgccttccatgggcggacgctggcgacgctg
gctgccgcgggcaatgagaaatatctcgaaggtttcgggccgacggtcgagggcttcgac
catgtcgacctcggcgatgtcgcggccgtcgaagcggcgatcgggccggaaaccgccgcg
atcatgctggagccgatccagggtgagggcggcgttcgcacggcgacgccggaatttttg
aaagccgttcgcgagctttgcgacaagcacggtgtgctgctcgtgctggacgaagtccag
accggcatgggccgtacgggcaagctcttcgcgcacgaatgggcaggcattacgccggac
gtgatggcggtcgccaaaggcttcggcggcggctttcccgtcggcgcggtgctggcgacg
gcagaagcagcgaagggcatgacgcccggcacacacggctcgacgttcggcggcaacccg
ctcggcatggtggtcgcctcgaccgtcatcgacattgtctccgagccggattttctcgaa
gccgtgcgtgataagacgctgcggctgaaacagggtcttgaagggctcaaggatcagcac
gccgatcttatcgaagaggtgcgtggcgccggcctgctcatggggctgaagctcaagtcg
cacgtcacgccgccgcaagtggtgaaagccgccaacgctgaaaaactgctgctcgtcggc
gcgggcgacaactgcgtgcgcgtgctgccgcctctcatcgcgaccgatcaggatatttcc
gatgggttgctcgctctttcccgcgcgcttggccgcgtggctggtgaaacgtcctga
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