Hyphomicrobium sp. MC1: HYPMC_0818
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Entry
HYPMC_0818 CDS
T01557
Symbol
lysS
Name
(GenBank) lysyl tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYPMC_0818 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hmc01007
]
HYPMC_0818 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hmc03016
]
HYPMC_0818 (lysS)
Enzymes [BR:
hmc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HYPMC_0818 (lysS)
Amino acid related enzymes [BR:
hmc01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HYPMC_0818 (lysS)
Transfer RNA biogenesis [BR:
hmc03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HYPMC_0818 (lysS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1e
tRNA-synt_1c
tRNA-synt_1g
DUF903
Motif
Other DBs
NCBI-ProteinID:
CCB64051
UniProt:
F8JE36
LinkDB
All DBs
Position
complement(806363..808015)
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AA seq
550 aa
AA seq
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MTALVFTPEQSTASADSKAWPFEEARRLLKRLERIPGGDTKTVLFETGYGPSGLPHIGTF
GEVARTTMVRHAFETLTEGKRKTRLLCFSDDMDGMRKIPENVPDRKALEPYLQMPLTTVP
NPFGGDYASFGDHNNAMLRRFLDTFGFEYEFASATEYYKAGRFDDMLLRAVERYDAIMKV
MLPTLGPERQATYSPFLPISPTSGRILYVPMKEVNAKDGTITFADEDGRDVTLPVTGGRV
KLQWKPDFGMRWVALGVDFEMFGKDHQTNAPIYDKICEILGGVPPQHYVYELFLDDKGEK
ISKSRGNGLTIDEWLTYASPESLALFMYQKPRSAKRLYFDVIPRAVDEYLQFLSSFPKQD
SKQQIDNPVWHIHAGSPPKPEIPVTFGLLLNLVSVSHAHTKDVLWGFLRRYAPGAEPENA
PILDKLAGYAIRYYEDFVKPTKKFRAPDDVEIEALKSLDAALAALPSDADGDTIQNALLD
VGRSLPRYQDTTKTSPSGGPGVKLDWFQAIYEILLGQERGPRLGTFVALYGIPETRALIA
KALGGELAAA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcactcgtcttcacgcccgagcagtccaccgccagcgccgactccaaggcttgg
cccttcgaagaagcgcgccggctgctcaagcgcctggagaggattcccggcggcgacacc
aagacggtcctgttcgagacaggctacggaccttcgggtctgccgcacatcggcacgttt
ggcgaggttgcgcgcacgacgatggtgcgccatgccttcgagacgctgaccgaaggcaag
cgcaagacccgccttctctgcttctccgacgatatggacggcatgcgcaagattccggaa
aacgttccggaccggaaagcgctcgaaccgtatctgcagatgccgctgacgacggtcccc
aatcccttcggcggcgactacgcaagcttcggcgatcacaacaacgccatgcttcgccgc
ttcctcgataccttcggcttcgaatacgaattcgcgagcgcaaccgaatactacaaggcc
ggacgcttcgacgacatgctgctgcgcgccgtcgaacgctacgacgccatcatgaaggtc
atgctgccgacgcttggcccggaacggcaggcaacgtacagccccttcctgccgatctcg
ccgacgagcggtcgcatcctttatgtgcctatgaaggaagtgaacgccaaggacggcacc
atcaccttcgccgacgaagacggccgggatgtcacgctgcccgtcaccggcggccgcgta
aagctgcaatggaagcccgacttcggcatgcggtgggtcgcgctcggcgtcgacttcgaa
atgttcggcaaggaccatcagaccaatgcgccgatctacgataaaatctgcgagatcctg
ggcggcgtgcctcctcagcattacgtctacgagctgttcctcgacgacaagggcgagaag
atttcgaagtcgcgcggcaacggcctgacgatcgacgaatggctgacatacgcctcgccg
gaaagcctcgcgctgttcatgtatcagaagccacgcagcgccaagcgtctctacttcgac
gtcatcccgcgcgcagtcgacgaatacctgcagttcctgtcgtcgttcccgaagcaggat
tcaaagcagcagatcgacaatccggtctggcacattcacgccggcagcccgccgaagccg
gaaattccggtgacgttcggcttgctgctcaatctggtgtcggtatcgcacgcccacacc
aaggacgtgctgtggggcttcctgcgccgctacgcgccgggcgccgagcccgagaacgca
ccgatcctcgacaagctcgccggctacgcgatccgctactacgaagacttcgtcaagccg
acgaagaagttccgcgcgcccgacgatgttgagatcgaagccctgaagagcctcgacgcg
gcactcgcagctttgccgtcagacgccgacggcgacaccatccagaatgcgctgctcgac
gtcggccgctcccttccgcgctatcaggacacgaccaagaccagccccagcggcggcccc
ggtgtaaaactcgattggttccaggcgatctatgagatcttgctgggccaggaacgcggc
ccgcgtctcggcacctttgtcgcgctgtacggcattcccgaaacccgcgcgttaattgcg
aaagcgctcggcggcgagcttgccgctgcgtaa
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