Haloferax mediterranei: HFX_2791
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Entry
HFX_2791 CDS
T02129
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hme
Haloferax mediterranei
Pathway
hme03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HFX_2791 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hme03021
]
HFX_2791 (rpoD)
Enzymes [BR:
hme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HFX_2791 (rpoD)
Transcription machinery [BR:
hme03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HFX_2791 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
DUF5978
DUF4198
GFO_IDH_MocA_C
Motif
Other DBs
NCBI-ProteinID:
AFK20466
UniProt:
I3R8A6
LinkDB
All DBs
Position
1878019..1878801
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AA seq
260 aa
AA seq
DB search
MANDFEVEFIEREDRRARFVVNGLTPALANGIRRAMVADVPTFSIDTVRFVENTSVMFDE
MIGLRLGLVPLTTPLDEFEPGDTVTVALEVDGPATAYSGDIESADEMVVPADENIPIIEL
KEGQRLEFEADAVLGYGKDHAKNQGGVAVGYRHLQRVEVVGDAGEFEEQEPNILRGVIEE
AAAEHADDEDAEDGDLVVTDEFGNDLTKRYPGKEVEVHDVPGAFVFSVETDGSFTVDELV
KRSVASLGDRAAELEEKVAL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgacttcgaggtcgagttcatcgaacgcgaggaccgacgcgcccgtttcgtc
gtgaacggtctgaccccggcactagccaacggcattcgccgggcgatggtcgccgacgtg
ccgacgttctctatcgacaccgttcggttcgtggagaacacatcggtcatgttcgacgag
atgatagggcttcgtctcggtctggttccgttgaccacgcccctcgacgagttcgagcca
ggtgacactgtcaccgtcgcgctcgaagtcgatgggccggcaaccgcatactctggggac
atcgaatccgcggacgaaatggtcgttcctgcggacgagaacatcccaatcatcgagctg
aaggagggccagcgcctcgaattcgaggctgacgccgtccttggttacggaaaagaccac
gccaagaatcaaggcggggtcgccgtcggctaccgacacctccaacgcgtggaggtcgtc
ggcgatgctggcgagttcgaggaacaagagccgaacattctccgtggcgtcatcgaagag
gccgcggcagaacacgcggacgacgaggacgccgaagacggcgacctcgtggtcacagac
gagttcggtaacgacctgacgaagcggtaccccggcaaagaggtcgaagtgcacgacgtg
ccgggagcgttcgtcttcagtgtggagacggacggttccttcaccgtcgacgagctcgtg
aagcgctctgtcgcctccttaggtgaccgcgcagccgagctcgaagagaaggtcgcactg
taa
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