Hydra vulgaris (swiftwater hydra): 100200169
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Entry
100200169 CDS
T01080
Name
(RefSeq) tropomyosin-1-like
KO
K09290
tropomyosin 3
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04814
Motor proteins
hmg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100200169
04820 Cytoskeleton in muscle cells
100200169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hmg04812
]
100200169
Cytoskeleton proteins [BR:
hmg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
100200169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
MscS_porin
Crescentin
Sec10_N
Fib_alpha
LegC3_N
Fez1
Laminin_I
EzrA
XhlA
DUF724
DUF2913
Motif
Other DBs
NCBI-GeneID:
100200169
NCBI-ProteinID:
XP_002165211
UniProt:
A0A8B6XS41
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All DBs
Position
10:complement(6200474..6202126)
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AA seq
249 aa
AA seq
DB search
MDSGGKLAKLKSKLAEISSQIDDADNRKNEAKTSMVEATSRLEKAESEVASYLRKIQLLE
KDYNEVVSRCEALEEKLAITQDKGMSVEEARKQLEENENEGDEKIQRLEEEVKEAKRLLE
ENETKSNESERRRVVVFRDIERTAAKADSLEKRIQVLQETIDNATISLKELEAREGESSQ
REEYNAEQIVMLEGKYKEAEVRAEANERNCCVLERNIKELEDEIEKVKKLTIDIENEIAD
MDDVGEDDD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggattctggtggcaaactcgctaaacttaaatcaaaacttgcagaaatttcatcgcaa
attgatgatgctgataacagaaaaaatgaagccaaaacctctatggttgaagcaacatct
agattagaaaaagctgaaagcgaagttgccagttacctacgaaaaattcaacttctggaa
aaagactacaatgaagttgttagcagatgtgaggctcttgaagaaaagttagctataacg
caagataaaggtatgtctgtagaagaagctcgaaaacagttggaagaaaatgaaaacgaa
ggtgatgaaaaaatacaaagactcgaggaagaagtaaaagaagcaaaaagacttttagaa
gaaaatgaaacaaaaagcaatgaatctgaacgacgtagagtggttgtattccgtgatatt
gaaagaactgcagctaaagctgattctttagagaaaagaattcaggttcttcaagaaaca
attgacaatgctactataagccttaaagaactagaagctcgtgaaggagaatccagtcag
cgtgaagagtataatgcagagcaaattgttatgttagaaggaaaatacaaagaagctgaa
gtacgtgctgaagctaatgaaagaaattgttgtgtgttggaaagaaatatcaaagaattg
gaagatgaaattgaaaaagtcaaaaagttaacaatagacatagaaaatgaaattgcagat
atggatgatgtaggagaggatgacgattaa
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