Hydra vulgaris (swiftwater hydra): 100207139
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Entry
100207139 CDS
T01080
Name
(RefSeq) oocyte zinc finger protein XlCOF6 isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg00310
Lysine degradation
hmg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100207139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hmg03000
]
100207139
03036 Chromosome and associated proteins [BR:
hmg03036
]
100207139
Enzymes [BR:
hmg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100207139
Transcription factors [BR:
hmg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100207139
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
100207139
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100207139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-H2C2_5
zf-C2H2
zf-C2H2_4
SET
DUF6176
zf-C2HE
zf-C2H2_11
Mvb12
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
100207139
NCBI-ProteinID:
XP_047146758
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Position
13:complement(11377762..11407642)
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AA seq
613 aa
AA seq
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MEINSNKNSVLNEVVGQNNAQENVLKKSYQLRSKEYPKRGKETNHKKIPENVKSTNTKEA
KIKIRDKTKNCKEVVHANDKDKEEEHLSEFENHVEKTLILTPPEGMEIKKSLIPNAGLGV
FATQKFDVDIIFGPYQGIKVPLDVPKDDIDTSYMWRVMKDGVDVYYIDGKDERYANWMRY
INCSRYEAEQNLEAFHCQGEIYYRIYKQVEKGKEFLVWYGDEYAKDLGIEGSYPCRKCSE
CFTSEEFLKSHIKRCKTRGRNNIIQALSMVHPNEFTVDLTSCSNVNGNNTSVGFENYSEC
NENLMFTPKTSLTDQLQTESNNKTLKCSYCEFECFMVSELTKHIGIHLVNNLNKCPFCDY
KCMRPYIMEKHMQVHCYKKTFKCTFCLYKSTTMERLERHLRVHLNCREAGQLQTQNCEKP
FKCKYCNFESAYEMDLKRHSRYHYLVKLLKCTYCDYICKAANNFRLHMRTHTGEKPFKCS
YCEYKCAQKSNLTVHLRIHSNEKPFKCTYCNYECKQKFNLTLHTRTHTKVKPYKCPYCDY
KCSSKLAITTHKRKHTLEKPFHCTICDYKCSIKGYLKIHERTHANDKPFKCTVCNYSSNV
KSNLKKHSKLHMQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggagattaatagcaacaagaattcagttttaaatgaagttgttggacaaaataatgct
caagaaaatgtcttaaaaaagtcttaccaactacgaagtaaagagtatccaaaaagaggt
aaagaaacaaaccacaaaaagattcctgaaaatgtcaaaagtacaaatacaaaagaagca
aagattaaaataagagacaaaacaaaaaactgtaaagaagtagttcatgctaatgataaa
gacaaagaagaagagcatttatctgaatttgaaaatcatgttgaaaagactttaattctt
actcctccagaaggcatggaaattaaaaaaagtcttataccaaatgctggtcttggagta
tttgctactcaaaaatttgatgttgatataatatttggaccatatcaaggaattaaagtt
cctttagatgttccaaaagacgatattgatacaagctacatgtggcgtgtaatgaaagac
ggagttgacgtgtattacatagatgggaaagatgaacggtatgctaattggatgagatat
ataaattgttcacgatatgaggcagagcaaaatcttgaagcttttcattgtcaaggtgaa
atttattatcgaatttataaacaggttgaaaaaggaaaggagtttcttgtttggtatgga
gatgagtatgcaaaagacttaggaatagaagggagttatccgtgcaggaaatgctcagaa
tgttttacttctgaagaatttttaaaatcgcacatcaaacgttgtaaaaccagaggtaga
aataacataattcaagcattatcaatggttcatccaaacgagtttacagttgatttaaca
tcttgctcaaatgttaatggcaacaacacttctgttggttttgagaattattccgagtgc
aatgaaaatttaatgttcactccaaaaactagtttgacggaccaattgcaaactgaaagt
aataataaaactttaaaatgtagttactgcgagtttgaatgttttatggtatccgaactc
acgaaacatataggtattcaccttgttaataacctgaacaagtgccccttctgtgattac
aaatgtatgcgtccatatataatggaaaagcatatgcaagttcattgctacaaaaaaaca
tttaaatgtacattctgtctttataaatccacaacaatggaaagattagaaagacattta
agagtacacttgaattgtagagaagctggacaattacaaacacaaaattgtgaaaaacca
tttaaatgtaaatactgcaactttgaaagcgcctatgaaatggatttgaaaagacactca
agatatcactatcttgtaaaactactcaagtgcacttattgtgattatatatgtaaagct
gcaaataatttccgattgcatatgcgaactcatactggtgaaaagccgtttaaatgttct
tactgtgaatataaatgcgcacaaaaatcaaatttaacggttcacttaagaatacatagc
aatgagaaaccatttaaatgtacctattgcaactatgagtgcaaacagaaatttaattta
acacttcatacaagaactcacactaaagtcaaaccatacaaatgtccttattgcgattat
aaatgttcgtcgaagttggctatcacaacgcacaaaagaaaacacactttagaaaaaccg
tttcattgcactatttgtgattataaatgttcaataaaaggttatttaaagattcacgaa
cgaactcacgcaaacgacaaaccatttaaatgtacagtttgcaattatagtagtaacgtc
aaatctaatttaaagaaacactctaagttacacatgcaataa
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