Hydra vulgaris (swiftwater hydra): 100208496
Help
Entry
100208496 CDS
T01080
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100208496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmg03021
]
100208496
Enzymes [BR:
hmg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100208496
Transcription machinery [BR:
hmg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
100208496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
100208496
NCBI-ProteinID:
XP_047141151
LinkDB
All DBs
Position
2:complement(2272927..2348399)
Genome browser
AA seq
1127 aa
AA seq
DB search
MTVSSHMEDASPIKRVEDKWKLVPAFLKVKGLVKQHIDSFNYFINTEIKDIVKANERVQT
DADPVWYLKYLDVHVGAPDVEESFNVSRPVAPHECRLRDLTYSAPITVDIEYTRGNQRVV
RNSLPIGRMPIMLRSSNCVLAGKNEIELAKLNECPIDPGGYFVVRGSEKVLLIQEQLSKN
RMIVELDTKNHQVSCSVTSATHEVKSRTAVIQKHGKFYLKHNSFTEDVPLCTIFKAMGIE
SDQEIVQMIGIEEEVLNYFAASIEEASMLQIYTKNQALNLLSSKIKQRQMWGQQMSKMDE
CKQLLFKTLLAHVPITKTNCRPKAAYLALMVRRIILAVKGVIKIDDKDYYGNKRLELAGQ
LVSLLFEDLFKRFNMELKKIADVTIPKPRAAQFDIVKHMRQDLISNGLINAISTGNWIIK
RFNMHRVGVSQVLSRLSYISALGMMTRVTSQFEKTRKVSGPRSLQPSQWGILCPSDTPEG
EGCGLVKNLALMTHVTTDQVQYPIRRLLCNLGVEDINLLSGEEFSSPLVHLVFLDGNIIG
LIRHHRRLIKTFRLMRRAGYINEFVSIYPSHSHRCVYISSDGGRMCRPYIIVKKGRPCVT
QQHITELSNGTRTFEDFLHQGLIEYLDVNELNDSEIALYEEGCTKDTTHMEIEPFTLLGV
CVGLVPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLVYPHQPMVKSKTLDI
IQFEKLPAGQNATVAVMSYSGYDIEDALIINKSSLDRGFGRCLVYKKQVCNLKRYANQTF
DRVMGPSRDAKTGEIIWKHKVLDTDGICRAGEQVLDKQVLVNKSMPTITNQLTQTTAGQL
NTTDYKDVPTSYHGPIPSYVEKVLISSTMEDAFLIKMLMRQTRRPEIGDKFSSRHGQKGV
CGLIVNQEDMPFTDLGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVMEGKFHYGTAFGG
SKVVDVCETLVNHGFNYAGKDFLTSGINGEPLSAYIYMGPVYYQKLKHMVLDKMHARAKG
PRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLIVERLMISSDAFEIDVCSKCGLI
GYSGWCHYCQSSHHISTIKIPYACKLLFQELQAMNIVPRISLEKYLS
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaagttcacatatggaagatgcatctcctatcaaaagagtagaggacaagtgg
aagttggttccagcttttttgaaggtgaaaggacttgtaaaacaacacatagattctttt
aactattttattaatacagagataaaagacatagtaaaagctaacgaaagagttcaaaca
gatgctgatcctgtttggtaccttaaatatttagatgttcatgttggtgctccagatgta
gaagaatcttttaatgtttctcgtcctgtagcaccacatgagtgccgattgcgtgatcta
acttattctgctccaatcactgttgatatagagtacacaagaggaaatcagagagtcgta
agaaacagtttaccaattgggagaatgccaatcatgctgcgtagctcaaactgcgtactt
gcaggcaaaaatgaaatagagttagccaagttaaacgaatgtcctattgatccaggtgga
tattttgttgttcgtggctctgaaaaagttcttcttattcaggagcagctgtcaaaaaat
agaatgattgttgaacttgataccaagaatcatcaagtgagttgctcagttacaagtgca
acacatgaagtgaaaagtagaacagctgtcatacaaaagcatggaaagttttatttgaag
cacaactcatttactgaggatgttccactctgtaccattttcaaggcgatgggtattgag
tcggatcaagaaattgttcaaatgattggtattgaggaggaagtgcttaattattttgct
gcatcaattgaggaagcaagcatgctacaaatatataccaaaaatcaggctttaaatttg
ttatctagtaaaattaaacaaagacaaatgtggggtcagcaaatgtctaaaatggatgaa
tgcaaacaattgcttttcaaaacattactggctcatgtacctataacaaaaacaaactgt
cgtccaaaagctgcatatcttgctttgatggttcgaagaattattcttgctgtaaagggt
gttattaaaattgatgataaagattattatggcaacaagcgtctagagttagctggtcag
ttggtttctttactttttgaagatttgttcaaacgatttaatatggagctgaagaaaatt
gcagatgttacaattccaaaacctagagcagctcagttcgacattgtaaaacatatgaga
caagacttgatttctaatggacttataaatgctatatcgacaggaaattggattattaag
cgatttaatatgcacagagtgggcgtatctcaagtactttctcgtctgtcttacatttct
gctctaggaatgatgacaagagtaaccagtcaatttgaaaaaactcgtaaagtaagtgga
ccacgctcattgcaaccatctcaatggggaattttgtgtccatctgatacacctgaagga
gaaggatgtggtttagtaaaaaatcttgcattaatgactcatgttacaacagatcaagtc
caatacccaattagacgcttattatgcaatcttggagttgaggatattaatcttttatct
ggcgaagaatttagttctccattggttcatttggtttttttagatggtaacattattggt
ttaattcgtcaccatcgtcgtttgatcaaaacatttcgattaatgagaagagctggttat
atcaatgaatttgtttctatttacccaagtcattctcacagatgtgtgtatatttcatca
gacggtggacgaatgtgcaggccttatatcattgttaaaaagggacgtccttgtgtaacc
cagcagcatattacagagttatcaaatggaacaagaacatttgaagatttcttgcaccaa
gggcttatagaatatttggatgtgaatgagcttaatgattctgaaatagcactgtatgag
gaagggtgtacaaaagacacaacacatatggagattgaacctttcacactacttggtgta
tgtgttggactagtgccgtatcctcatcacaatcaatcacctagaaatacttaccaatgt
gctatggggaaacaagccatgggtactattggttacaatcagagaaatagaattgatact
ctaatgtacttgcttgtttatccacaccaaccaatggtaaaatccaagactttagacata
attcagtttgagaaattacctgctggtcagaatgcaacagtagctgtcatgagttatagt
ggttatgacatagaggatgctttgatcatcaataaatcttcattagatagaggttttggc
aggtgtctggtgtataaaaaacaagtatgcaatttaaaaagatatgctaaccagacattt
gacagagtaatggggcctagtcgtgatgcaaaaaccggtgaaatcatttggaaacataaa
gttttagacacagatggaatatgtcgagctggtgagcaggttttagataaacaagttctt
gtaaacaagtcaatgccaaccattacaaatcaattaacacaaacaactgcaggtcagctc
aatacaacagactacaaagatgtaccaacatcctatcatggtccaattccttcatatgtt
gaaaaagttctaattagttcaacaatggaagatgcatttttaattaagatgcttatgaga
caaacaagaagaccagaaattggagataagtttagtagtagacatggacagaaaggagtt
tgcggtttaattgtaaatcaagaagacatgccttttactgacctgggtatatgcccagat
ataatcatgaatcctcatggttttccctcaagaatgacagttggtaaacttatagaattg
cttgctgggaaagcaggtgtcatggaaggaaagtttcattatggaacagcatttggtgga
agtaaagttgttgatgtttgtgaaactcttgtaaatcatggtttcaactatgctggaaaa
gattttttaacctctggtatcaatggggaaccattgtctgcttatatttacatgggtcca
gtgtactaccaaaaattaaaacacatggttttggataaaatgcatgctagagccaaagga
ccacgggctgtactaacacgccaaccaacagaaggtcgctctagagatggtggcttacgg
ttaggtgaaatggaaagagactgtttaattggttatggagctagcatgttaattgtagaa
agactaatgatttctagtgatgcttttgaaattgatgtttgtagtaaatgtggcttaatt
ggttattcaggctggtgtcactattgtcaatcgtctcatcacatatcaactattaaaata
ccttatgcctgcaagcttttatttcaagagctacaagcaatgaatatagttcctcgcata
tccttagagaaatatctttcttga
DBGET
integrated database retrieval system
