KEGG   Hydra vulgaris (swiftwater hydra): 100210790
Entry
100210790         CDS       T01080                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03020  RNA polymerase
hmg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100210790
  09124 Replication and repair
   03420 Nucleotide excision repair
    100210790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hmg03021]
    100210790
   03400 DNA repair and recombination proteins [BR:hmg03400]
    100210790
Transcription machinery [BR:hmg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100210790
DNA repair and recombination proteins [BR:hmg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100210790
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Ogr_Delta Lar_restr_allev Zn_ribbon_recom DUF3716 HVO_2753_ZBP
Other DBs
NCBI-GeneID: 100210790
NCBI-ProteinID: XP_002157610
UniProt: T2MGF5
LinkDB
Position
5:complement(18715151..18720768)
AA seq 131 aa
MYNEDEDEQSEKNSGPGFVGIKFCQECNNMLYPKEDKERKILNYSCRNCSYQERAQNSCI
YVNMIVHDVNELSQIIGDVVTDPTLPKTTDHPCPKCGHNEAVFFQSQSNKADHMRLYYVC
CGMNCQHKWSE
NT seq 396 nt   +upstreamnt  +downstreamnt
atgtataacgaagatgaagatgaacagagtgaaaaaaattctggacctggatttgttggc
atcaagttttgccaggaatgtaacaatatgttgtatccaaaagaagataaagaaagaaaa
atattaaattacagttgtagaaattgcagctatcaagaacgcgcacaaaattcttgcatc
tatgtcaacatgattgttcacgatgtaaatgagttgtcacagattattggagatgttgtt
acagatccaacgctcccaaagacaacagatcatccttgtccaaagtgtggccacaatgaa
gctgtattctttcaatcacagtcaaataaagctgatcacatgcgattgtattatgtctgt
tgtggtatgaactgtcagcataaatggtctgaatga

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