Hippea maritima: Hipma_1383
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Entry
Hipma_1383 CDS
T01456
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K13797
DNA-directed RNA polymerase subunit beta-beta' [EC:
2.7.7.6
]
Organism
hmr
Hippea maritima
Pathway
hmr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hmr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hipma_1383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hmr03021
]
Hipma_1383
03400 DNA repair and recombination proteins [BR:
hmr03400
]
Hipma_1383
Enzymes [BR:
hmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hipma_1383
Transcription machinery [BR:
hmr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Hipma_1383
DNA repair and recombination proteins [BR:
hmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Hipma_1383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AEA34339
UniProt:
F2LXU8
LinkDB
All DBs
Position
complement(1356065..1360627)
Genome browser
AA seq
1520 aa
AA seq
DB search
MFTVLKGKPKSSKDFDAIRIKLASPEKIREWSHGEVKKAETINYRTFKPERDGLFCAKIF
GPIKDYECLCGKYKRQKYEGIVCEKCGVEVTKSKVRRERMGHIELAAPVAHIWYLRSVPS
IMASLLDVKLKDLERVIYYESYIVIESEVEELPVKTVLNESQYRSYSEKYGIRFTAEMGA
SAIQKLLRKMDLDLLILELKDEIESTKSEAKKKKLIKRMRLAEQFKRSGNKPEWMILDVL
PVLPPDLRPLVSLEGGRFASSDLNDLYRRVINRNNRLKRLMELGAPSIIIRNEKRMLQEA
VDALIDNGRRKQVVRASNNRPLKSLSESIRGKEGRFRRNLLGKRVDYSGRSVIVSGPNLR
MDQCGLPKIMALELFKPFIHHKLIEEGYAQTVKAAKKMVERKDPEVWNILEDVVKEHPIL
LNRAPTLHRLSIQAFHAVLTDEKAIRLHPLVCPAFNADFDGDQMAVHVPLSTEAVLESEV
LMLATENIISPAHGNPIAMPSQDMVLGVYYMTKAKDNQKGEGMVFSSPEEVRIAYENGVC
SLNAKIKVRVDSEIHDTTVGRILFYEIVPKIIPFKDVNKLFKKKDLNKLISYLYKHADLP
VVVKFLDDVKDLGFETSTRAGVSISIEDMVVPEEKSEIISKAEEEVRKIQEDYRQGLLTD
KERYNKSVDIWSSATDRIAAAMMKQLGGEYGESFNSIYIMADSGARGSQQQMRQLAGVRG
LMAKPSGDIIETPIKSNFKEGLTVLEYFTSTHGARKGLADTALKTANAGYLTRKLVDVAQ
DVTITMDDCGTTEGIEVSAIMVNGEEIESLADRILGRTAAEDIVDPFTNEVIVEEGNEID
EEAVEKITAAGIRQVRIFSTLTCKAERGVCAKCYGRDLARSGKVNVGEAVGIIAAQSIGE
PGTQLTLRTFHVGGTASRLSKENKSAETKRAGIVRFFNFYTALNSDNERVLLSRRDAALL
VTEPQIVSINKGRVNIEEDKAYYYLRIGSEEYKLKKVDFVNQEDIIAGGANAIGKYIFSV
KDGDEVESLSLLVERVLEIFDVPKKIPYAAKVFVENGQTIKRFVKAEEGGKVKLIALEGD
GFVEIDTPKDGVINRHGTHVVIMKNNEEKVRYYVPKGSKLYIKSGDTIESGTLIVGYDDE
KKRRIFESDPTLYISTTTLAEWDAYSDYLLAGAEGYVKWVDLIPHVTIKEEVDKITSLKS
NVVVESKDLTKRPRIEIVDENGKIKKFSNINEDAMYYIPPGVILQKENGEYVRAGDVIGK
IPKELDKTTDITGGLPRVSELFEAKKPKNAAIISEISGVVSYGKESKGKRKVIVTSTVGK
GGVKKEYLIPRNKRLLVFPGDRVEMGEPLTDGAINPHDILAILGERELQKMLVSEIQQVY
KLQGVSINDKHIEIIVRQMLSKVVIEDAGDSDFIEGEVVNRFVFTRKNEILRRRGKKPAI
GRIVLLGITKASLNTDSFISAASFQETTRVLTEASISGQVDYLRGLKENVIVGRLIPVGT
GQKKFDEIILEPAEKDEQEN
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgtttacagttctaaaaggtaagcctaagtcttccaaggactttgatgctataagaata
aaattggcatcgcctgaaaagattagagaatggagccacggagaggtaaaaaaagctgaa
actattaactatagaacctttaaacccgaaagggatggtttgttttgcgcaaagatattc
gggcctataaaggactatgaatgcctatgtggtaagtataaaaggcagaaatatgagggt
atagtttgtgaaaagtgcggtgttgaggttacaaagtctaaggttagacgcgaaaggatg
gggcacatagagcttgcagcacctgtagctcatatttggtatttacgctcggttcccagc
ataatggcttccctgcttgatgtaaagctgaaggatttagaaagagtcatctattatgag
tcttacatagttatagagagtgaagttgaggaattgcccgtaaaaaccgttttgaacgaa
tcacaatataggtcttattctgagaagtatggcataagatttacagctgagatgggtgcc
tctgctatacagaaactcctaagaaaaatggacttagaccttctaattttagaacttaaa
gatgaaatagaatcaacaaagtcagaggcaaagaagaaaaagcttataaagagaatgaga
cttgccgagcaatttaagcgaagtggtaataaaccagaatggatgatattggatgtctta
cctgttttaccgcctgatttgaggcctttggtgtctttggagggtggcaggtttgcatca
agtgatttaaacgacctctacaggagggttataaatagaaacaataggctaaagaggctg
atggaacttggagcaccgtcaattatcataagaaatgagaagagaatgctccaggaggct
gttgatgcccttatagacaacggtagaaggaagcaagttgttagggcttcaaacaacagg
cctttaaagtcattgagtgagtctatcaggggtaaagaagggcgtttcagaagaaacctg
cttggaaagagggttgattattccggccgttccgttattgtttcaggtccgaatctcaga
atggatcaatgtggtttgcccaagattatggcccttgagctatttaaaccgtttattcac
cataagcttattgaagagggatatgcacaaactgttaaagcggccaagaagatggtcgag
agaaaagatccagaggtttggaatatacttgaagatgttgtaaaagaacacccaatctta
ctcaatagagctcctacactgcacagactttcaattcaggcattccatgctgtattgact
gatgagaaagctataaggttgcatccacttgtatgcccggcatttaatgcagactttgat
ggtgaccagatggcagtccatgtgccgttaagtaccgaggctgttttggagagtgaagtt
ttgatgcttgcaacggaaaacataatttcccctgcccatggcaatcctatagctatgccc
agtcaagatatggttctgggtgtttattatatgacaaaagctaaggacaatcaaaaaggc
gaaggcatggttttctcatcgccagaggaggttagaattgcctatgaaaacggtgtctgc
agcttgaatgctaagataaaggttagggtggattcagagatacacgatacaaccgttgga
aggattttgttctatgagatagtgccaaagataataccatttaaagatgtaaataagctc
ttcaagaaaaaggatttgaataaacttatatcctatctatacaaacatgcggatttacct
gttgttgtcaagtttttagatgatgttaaggatttgggatttgagacatcaacaagggca
ggtgtttctatatccatagaggatatggttgtacctgaagaaaaatcagaaatcataagt
aaagctgaggaagaggttagaaaaattcaagaagactacagacaaggtcttttaactgac
aaggaaaggtataataagtcggttgatatttggagttcagctacggatagaattgctgca
gccatgatgaagcaattgggcggagaatacggagaaagttttaattctatttacataatg
gccgactcaggggcaaggggctcgcagcaacagatgagacagttggctggtgttaggggt
ttgatggcaaaaccttctggtgatattatcgaaacgcctattaaatctaactttaaagag
ggattgacggttcttgaatacttcacatctacccacggtgcaagaaaaggtttagcagat
acagctttaaaaactgccaatgcaggttatctaacaagaaagcttgtagatgttgctcag
gacgttaccataacgatggatgattgtggaacgacagaaggtatagaagtatcagctatt
atggttaacggtgaggagattgagtccttggccgataggattttaggtagaacagccgcc
gaagatatagtagacccatttaccaatgaagttatagtagaagaaggtaacgagatagat
gaagaagctgttgagaagataacagctgctggtattaggcaagttagaatattctctacg
cttacatgtaaagcagagagaggcgtttgtgctaagtgttatggcagggatttggcaaga
agtggaaaggttaatgtaggtgaggcagttggcataatagcagctcaatctattggagag
ccgggaactcagcttacgcttagaacattccatgttggtggaacggcttcaaggttatct
aaggagaataagtctgccgaaacaaagagggctggtattgtaaggttctttaacttttat
acggctctaaattctgataatgaaagagtattgttatcaagaagagatgcggcgttactc
gttacagagccacaaatagtttcaataaataagggtagagttaacatagaagaggataag
gcttattactatctaagaataggttctgaagaatataagctcaaaaaggtagattttgta
aaccaagaagatattatagcaggtggcgcaaatgctatcggtaagtatatattctccgta
aaagacggagatgaagtggaaagcctgtctttgctcgtagagagagtgcttgaaatattt
gatgtccctaaaaagattccctatgctgctaaagtatttgttgagaatggtcagactata
aagagatttgtaaaagcggaagaaggcggaaaagttaaacttattgcacttgaaggtgat
ggttttgttgaaatagatacacccaaagatggcgtaattaacaggcatggaacccatgtt
gttattatgaaaaacaatgaagaaaaagtgaggtattacgtgcccaagggctctaagctc
tatattaagagcggggatactattgaatctggcacacttattgttggctatgatgatgag
aaaaaaaggagaatatttgaaagcgatccaacactttatataagcactacaaccttagca
gagtgggatgcttactcagattacctacttgcaggtgccgagggttatgtaaaatgggtc
gatttgattcctcatgttacaataaaagaagaggtggataaaatcacctctctgaaaagt
aatgtagttgttgagagtaaggatcttaccaagaggcctaggatagagatagtggatgaa
aatggtaagataaagaaattctcaaatataaacgaagatgccatgtattatatacctccc
ggtgttatactgcagaaagagaatggtgaatatgtaagggcgggtgatgttataggaaag
attcctaaagagcttgacaaaacaaccgatattacaggaggcctaccaagggtatctgaa
ttgtttgaggcaaaaaagcccaaaaatgcagctattatcagtgaaattagtggcgttgtt
tcctatggtaaggaaagcaagggcaaaagaaaggttatcgtgacatctactgtaggtaag
ggaggtgttaaaaaggaatacctcataccaagaaacaaaaggttgcttgtatttccaggt
gatagggttgagatgggcgagcctttgacagatggcgctataaatccgcatgatatattg
gccattttgggtgaaagagaacttcaaaagatgctggttagtgagattcagcaggtgtat
aagcttcaaggcgttagtataaatgataagcatatagagataatcgtcagacagatgctc
tccaaagttgtcatagaggatgctggtgatagtgatttcatagaaggtgaggttgtcaac
agattcgtatttacccgtaagaatgagatccttagacgcagaggtaaaaaaccggctatt
ggtaggatagtcctacttggtataacgaaagcatctcttaatacagatagttttatctct
gctgcaagcttccaggagactacaagggttttgacagaagcgtccataagcggacaggtt
gattatctaaggggattaaaagaaaatgtcattgtcggaagattaatacctgtaggtaca
ggacagaagaaatttgacgagataattttggagccggctgaaaaagatgagcaagaaaat
taa
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integrated database retrieval system
