Hyphomicrobium nitrativorans: W911_08770
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Entry
W911_08770 CDS
T02943
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hni
Hyphomicrobium nitrativorans
Brite
KEGG Orthology (KO) [BR:
hni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hni03009
]
W911_08770 (rimO)
Enzymes [BR:
hni01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
W911_08770 (rimO)
Ribosome biogenesis [BR:
hni03009
]
Prokaryotic type
ribosomal protein modification factors
W911_08770 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AHB48467
UniProt:
V5SDA1
LinkDB
All DBs
Position
complement(1825739..1827106)
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AA seq
455 aa
AA seq
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MTARSQSPGDPTATAPRSVKPAPKVGFVSLGCPKALVDSERIITKLRSEGYQVAPDYANA
DVVVVNTCGFLDSAKQESLDAIGEAMAENGRVIVTGCMGVEEGRIREVHPGVLAVTGPHQ
YEQVVTAVHDAAPPLHDPYIDLVPPEGLRLTPRHYAYLKISEGCNHRCSFCIIPSLRGDL
ASRPVNHVMTEAERLVKAGVKELLVISQDTSAYGLDIKYAEAPWKGAPLKARFLDLTRAL
GDLGAWVRLHYVYPYPHVDDVIPLMAEGRILPYLDIPFQHASPAVLKAMRRPAHQEKTAE
RIARWREICPDLAIRSTFIVGFPGETEEDFSMLLDWLRETRLNRIGCFKYEAVEGAPANA
LPGAVPEEVKEERWHRFMEAQQEISAEIQVARVGSEIDVIVDEVGPDGAIGRSKWDAPEI
DGTVFLESARTLKPGDIVKARVTGADDYDLFATVD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccgatcccaatctcccggcgatccgaccgccacagccccgcgctccgtcaag
cccgcccccaaggtcggcttcgtctcgctcggctgcccaaaagcgctggtcgacagcgag
cgcatcatcaccaagcttcgctccgagggctatcaggtcgcccccgactacgcgaacgcc
gacgtggtcgtcgtcaacacctgcggcttcctcgacagcgccaagcaggaaagcctggat
gccatcggcgaagcgatggccgagaacggccgcgtgatcgtcacgggctgcatgggcgtc
gaggaaggccgcatccgcgaggtgcaccccggtgttctcgccgtcaccggcccgcaccag
tacgagcaggtcgtcaccgccgtgcacgacgcggcgcccccgctccacgatccctacatc
gacctcgtaccccccgagggcctgcgcctcacgccgcgccactacgcctatttgaagatc
tcggaaggctgcaaccatcgttgcagcttctgcatcattccaagcctgcgcggcgatctc
gcgagccgccccgtgaaccacgtcatgacggaagccgagcgcctcgtgaaagcgggcgtg
aaagaactcctcgtcatcagccaggacacgagcgcctacggcctcgacatcaaatacgcc
gaagccccgtggaagggcgcgccgctcaaggcccgcttcctcgatctcacgcgcgcgctc
ggagacctcggcgcctgggtgcggctccactacgtctatccctatccgcacgtggacgac
gtcattccgctgatggcggaggggcgcatcctcccctacctcgacatccccttccaacac
gcttcgcccgccgtgttgaaagccatgcgccgcccggctcaccaggagaagacagccgag
cgcatcgcccgctggcgcgagatctgccccgacctcgccatccgctccaccttcatcgtc
ggcttccccggcgagaccgaggaagatttctcgatgctgctcgactggctgcgcgagacc
cgcctcaaccgcatcggctgcttcaagtacgaagccgtcgaaggcgcccccgcgaacgca
ctgccgggcgccgtgcccgaggaagtcaaggaggagcgctggcaccgcttcatggaagcc
caacaggaaatttcggcggagatccaggtcgcccgcgtcggcagcgagatcgacgtcatc
gtcgacgaagtcggccctgatggcgccatcggccgctccaagtgggacgcgcccgagatc
gacggcaccgtgttcctggaaagcgcacgcacgctgaagcccggcgacatcgtaaaggcc
cgcgtcaccggcgccgacgactacgacctcttcgcaacggtggactga
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