Hymenobacter nivis: DDQ68_00380
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Entry
DDQ68_00380 CDS
T05498
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
hnv
Hymenobacter nivis
Pathway
hnv00020
Citrate cycle (TCA cycle)
hnv00640
Propanoate metabolism
hnv00660
C5-Branched dibasic acid metabolism
hnv01100
Metabolic pathways
hnv01110
Biosynthesis of secondary metabolites
hnv01120
Microbial metabolism in diverse environments
hnv01200
Carbon metabolism
Module
hnv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hnv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DDQ68_00380
00640 Propanoate metabolism
DDQ68_00380
00660 C5-Branched dibasic acid metabolism
DDQ68_00380
Enzymes [BR:
hnv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DDQ68_00380
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Gene cluster
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
Ligase_CoA_2
Citrate_bind
Motif
Other DBs
NCBI-ProteinID:
AWM31376
UniProt:
A0A2Z3GJS3
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All DBs
Position
complement(67746..68942)
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AA seq
398 aa
AA seq
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MNIHEYQGKEILKKYGVRVQEGITADTVEEAVAAAEKLTADTGTSWYVIKAQIHAGGRGK
GGGVKLAKNLDQVKEVAGNILGMQLITKQTGPEGRKVHKILVAQDVYYPGETPTKEFYIS
VLLDRTSGKNVIIYTTEGGMDIEEVAESHPEKILKEFIDPAVGLQGFQARKIAFGLGLTG
EANKEMVKFVTALYKAYDETDSSMFEINPVLKTSDNKILAVDAKVTLDENALYRHKDFVA
LRDLNEEDPLEVEASASNLNYVKLDGNVGCMVNGAGLAMATMDIIKLSGGEPANFLDVGG
GANAQTVEAGFRIILKDPNVKAILINIFGGIVRCDRVANGVVEAYKKIGDIRVPIIVRLQ
GTNAEEGARIIDESGLKVKSATLLKDAAARVKEVLAEA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccacgagtatcagggcaaagaaattctgaagaagtacggcgtccgcgtccag
gaaggcatcacggccgatacggtcgaggaagccgtggccgcagccgagaaactgaccgcc
gacactggcaccagctggtacgtcatcaaggcgcaaatccacgccgggggccggggcaaa
gggggcggcgtgaagctggccaaaaacctcgaccaggtgaaggaagtggccggcaacatc
ctcgggatgcagctcatcaccaagcaaacgggccccgaaggccgcaaggtgcacaaaatc
ctcgtggcccaggacgtgtactaccccggcgaaacccccaccaaggaattctacatcagc
gtgttgctggaccgcaccagcggcaagaacgtcatcatctacaccaccgagggcggcatg
gacatcgaggaggtggccgagtcgcaccccgagaaaatcctcaaggaattcatcgacccc
gccgtgggcctgcaaggcttccaggcccgcaaaatcgccttcggcctgggcctgaccggc
gaggcgaacaaggaaatggtgaagttcgtgacggccctttacaaggcctacgacgaaacc
gattcgtcgatgttcgagattaacccggtgctgaaaacgtcggataacaaaatcctggcc
gtggacgccaaagtgacgctcgacgagaacgccctgtaccgccacaaggattttgtggcc
ctgcgcgacctcaacgaggaagaccccttggaagtggaggcttcggcttcgaacctgaac
tacgtgaagctcgacggcaacgtaggctgcatggtgaacggcgcaggcctggccatggcc
accatggacatcatcaagctgagcggcggcgaaccggccaactttctcgacgttgggggt
ggagccaacgcccagacggtggaagccggcttccgcatcatcctgaaggacccgaacgtg
aaggcgattctcatcaacatcttcggcggcatcgtgcgctgcgaccgggtggccaacggc
gtggtggaagcctacaagaaaattggtgacatccgcgtgcccatcatcgtgcgcctgcaa
ggcaccaacgccgaggaaggcgcccgcatcatcgatgagagcggcctgaaagtgaagtcg
gccacgctgctgaaagacgccgccgcccgcgtgaaggaagtactggccgaagcctag
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