Hemiscyllium ocellatum (epaulette shark): 132825635
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Entry
132825635 CDS
T09720
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc04020
Calcium signaling pathway
hoc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
132825635
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132825635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hoc04040
]
132825635
Ion channels [BR:
hoc04040
]
Ligand-gated channels
Glutamate (ionotropic)
132825635
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Rap-GAP_dimer
DUF6724
Motif
Other DBs
NCBI-GeneID:
132825635
NCBI-ProteinID:
XP_060696987
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Position
21:complement(20000009..20169235)
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AA seq
1022 aa
AA seq
DB search
MRSCGTNEKREFRSISTNDTGAGYSIAANSGRERGEGRGGEEKDKEHPSSIQQRSCPLLS
PAAGVARELRPDREPRHCSSMDRLLRLLLGFIAVFPLQSRAAPKVVNIGAVLSTKKTENI
FREAVAQANRKHGTYKIQLNATAVTHKPNAIQMALAVCEDLISSQVYAILVSHPPGPSDH
LTPTPVSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFEMMRRFRWG
HIILIVSNDHEGRAAQKKLETLLEEKESKNKKRNFENNDQHSYDSRRGPKAEKVLQFEPG
TTNMTSMLLEAKELEARVIILSASEDDAVTMYKTATFLNMTGPGYVWLVGEREISGRAMQ
HVPEGVIGLQLIDGKNETAHINDAVGIVAQSIHELFEKENITDPPKGCVGNTNIWKTGPL
FKRVLLSTKYREGFTGQVEFNDEGDRKFSNYSIVNVQKGKLVQIGVYNGTNVLLNDKKII
WPGGELNTPKGFQMSTKLKIVSIYQEPFVYVKPTLPDGTCEEEYTISGDPIKKVICTGPN
ATVPGHPIVPQCCFGFCIDLLIKLASTPTLNFTYEVHLVQDGKFGTQERVNNSNKKEWNG
MMGELLSGLGDMIVAPLTINNERAQYIEFSKPYKYQGLTILVKKEIPRSTLDSFMQPFQS
TLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIG
EGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFI
YATVKQSSVDIYFRRQVELSTMYRHMEKHNYENAADAIQAVRDGKLHAFIWDSAVLEFEA
SQKCDLITTGELFFRSGFGIGMRKDSPWKQAVSLAILSFHENGFMEDLDKTWVRYQECDS
RSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRK
NLQDRKSGSAEPDPKKKAPFRSLTSTLTSSFKRRRSSKDTQYRPTDITGQLNLLDSSVST
VV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgagaagctgcgggaccaatgagaagagagagttccgcagcatcagcaccaatgataca
ggagcaggctacagcattgcagcaaactcaggcagggagaggggagaggggagagggggg
gaagagaaggacaaggagcatccatcctccatccagcagcgctcctgtcccctgctatcc
cctgcagccggagtggccagagagctgcggccggacagggagccccggcactgcagcagc
atggaccgtctgctccggctgctgctcggcttcatcgccgtgttccccctccagagccga
gcagcgcccaaggtggtgaacatcggcgcggtgctgagcaccaagaagacggagaacatc
ttcagggaggcggtggcgcaggccaaccggaaacacggaacctacaaaatccaactcaat
gccacggcggtcactcacaaacccaacgctatccagatggccctggcagtgtgtgaagac
ctgatcagcagtcaggtgtacgcgatattggtgagtcacccacccggcccaagtgaccac
ctcacccctactccggtgtcttatacagctggcttctaccgaattcctgtcattggcttg
accacacgcatgtcaatatattcagataagagtatccatctctcttttctccgcactgtg
ccaccgtactcccaccaagctcaggtctggtttgaaatgatgaggcgtttccgttgggga
cacatcattctgatagttagcaatgaccatgagggccgggcagcacagaagaagctggag
acactcttggaagaaaaggagtcaaagaataaaaaaaggaactttgaaaacaacgaccaa
cattcgtatgacagcaggcgaggaccaaaggctgagaaggtcctacagtttgaaccaggc
accacaaacatgacatcaatgctgctagaagccaaggagctggaggccagagtcatcatc
ctctccgccagtgaagatgatgctgtaacaatgtacaagacagcaaccttcctgaatatg
actgggcctggctatgtttggcttgttggggagagagagatatctggcagggccatgcag
catgttccagaaggtgtgattggtttgcaactgatcgatggtaaaaatgaaacagcccac
atcaatgatgcagtgggtattgtggcacagtccattcatgagctctttgagaaggaaaac
atcaccgaccccccgaaaggttgtgtagggaacactaacatctggaaaactgggccactt
ttcaaaagggtgctgctgtccaccaagtatcgtgaagggttcactggacaagtggaattt
aatgatgaaggggatcgaaaattttccaactacagcattgtcaatgtgcaaaaagggaag
ctagtgcagattggagtgtacaatgggaccaatgttctgctgaacgataagaaaatcatc
tggccaggtggtgaactaaatacacctaaaggctttcagatgtcaactaaattaaagatt
gtcagtatttaccaggagccgtttgtatatgtgaagccaaccctaccagatggaacatgc
gaggaagagtatacaattagcggggaccccattaaaaaagtgatctgcaccggaccaaat
gcaactgtgccaggtcatcctattgtccctcagtgctgctttggattctgtattgatttg
ctgatcaaactggccagcactccgactctgaacttcacctatgaggttcatcttgtccaa
gatgggaaatttggaacacaggaaagagtgaataacagcaataagaaagaatggaacggg
atgatgggcgagctgctgagtggccttggtgatatgattgtcgcccctctaaccatcaat
aatgaacgtgcccagtatattgaattctccaaaccctacaagtaccaaggactcaccatt
ctagtgaagaaggaaatacctcgcagtaccctggattcattcatgcagccatttcagagt
acactgtggttgctggtgggcctgtctgttcatgtggtagctgtcatgctttatctcctg
gatagattcagtccctttgggcgatttaaagtgaacagtgaggaggaagaggaagatgcg
ctgaccctgtcctcagccatgtggttctcctggggtgtcctgctgaactctggaattgga
gaaggggcccccaggagtttttctgctcgaatcttgggcatggtttgggctggctttgcc
atgattatcgttgcttcatacacagccaacctggcagcttttctggtgttggaccgacct
gaggagcggatcactggaatcaacgatcccaggcttcgtaatccttctgataagtttatc
tatgctacggtgaagcagagctcagtggatatttactttcgtaggcaggtggaactgagc
accatgtaccggcacatggagaaacacaattatgagaatgcagctgatgctatccaggct
gtgcgagatgggaaactgcacgcattcatctgggactcagctgtgctggagtttgaagcc
tcccagaagtgtgacctcatcaccaccggtgaattgtttttccgatcggggtttgggatt
ggaatgcggaaggacagtccatggaaacaggctgtgtcactagctatattgagtttccat
gaaaatggttttatggaggacctggacaagacctgggttagatatcaggagtgtgactca
cgtagcaatgctccagccactctgacctttgaaaacatggcaggtgtctttatgttggtt
gctggcgggattgttgcaggaatatttttgatattcattgaaattgcttacaaacggcac
aaagatgctcgaaggaagcagatgcagctggcttttgctgctgtcaatgtctggagaaag
aatttgcaggatagaaaaagtggtagcgcagagcctgaccctaaaaagaaagcacctttt
agatcgctcacttcaacactgacctccagcttcaagagacgtaggtcttccaaagacacg
caatatcgccctactgacataactggacaactgaatctcttagactcgtctgtcagcacg
gtagtgtaa
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