KEGG   Hemiscyllium ocellatum (epaulette shark): 132829175
Entry
132829175         CDS       T09720                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
hoc  Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03020  RNA polymerase
hoc03420  Nucleotide excision repair
hoc04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:hoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132829175
  09124 Replication and repair
   03420 Nucleotide excision repair
    132829175
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    132829175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hoc03021]
    132829175
   03400 DNA repair and recombination proteins [BR:hoc03400]
    132829175
Transcription machinery [BR:hoc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     132829175
  RNA polymerase III system
   RNA polymerase III
     132829175
  RNA polymerase I system
   RNA polymerase I
     132829175
DNA repair and recombination proteins [BR:hoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132829175
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 132829175
NCBI-ProteinID: XP_060702507
LinkDB
Position
28:19072383..19085801
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRGQFGDKPSEGRPRRSDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgatgaagaggagacttatcgcttgtggaagatccgcaaaaccatcatgcagctt
tgccatgatcgtggatatttggtgacacaagatgaattggatcagacactggaagaattt
aggggtcaatttggagataagccaagtgaagggcggccacgacgttcagaccttactgtg
cttgttgctcataatgatgatcccactgatcagatgttcgttttctttccagaggagcca
aaagttgggatcaaaaccattaaaatgtattgtcaacgcatgcaggaagaaaatattacc
agagccatcattgtggtacaacaagggatgaccccatcagcaaagcagtctcttgttgac
atggctcctaagtatatccttgagcaattccttcaacaggaacttctaattaacattaca
gaacacgagcttgttccagagcacatagtcatgaccaaggaggaagttacagagctactg
gcacgatataagttaaaggagagccagttgccaagaatacaagcaggtgatccagtggca
cgatactttggattgaaaagagggcaggtggttaagattataagacctagtgagactgca
ggaagatacattacgtacagacttgtgcagtga

DBGET integrated database retrieval system