Haliangium ochraceum: Hoch_2498
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Entry
Hoch_2498 CDS
T01103
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hoh
Haliangium ochraceum
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hoh03009
]
Hoch_2498
Enzymes [BR:
hoh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Hoch_2498
Ribosome biogenesis [BR:
hoh03009
]
Prokaryotic type
ribosomal protein modification factors
Hoch_2498
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ACY15034
UniProt:
D0LKI6
LinkDB
All DBs
Position
3437746..3439206
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AA seq
486 aa
AA seq
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MSQSPSASAPTAQDPGAAPAVAPRKVFFVSLGCPKNRVDTEVMLGHAGGAGYRIVAEPDE
ADVIVVNTCGFIEAAKEESVDTILEMAEYKKQNCEALVVTGCLSQRYPEELAAEIPEIDH
LLGSADFRQLNSALGSALSAKAGASPARPARSSLPVIQVSETPSDLYDHTTPRMRSGALH
SAYLKIAEGCDRPCSFCIIPKLRGPQRSRSIDSVVAETEALVAGGAREINLIAQDLTRYG
ADLPAGPDGRPNLAGLLRRVARVPGVRWVRLHYTYPSAFTDELIEVIAEEPTVVKYIDVP
LQHIDDEMLKRMRRGHSARVTHELVAKLRQRIDGLVLRTTFIVGHPGETDESFGRLLDFV
RETRFERVGAFTYSIEPGTVSGMLPNRVPPEVAEARRDELMALQSEIHRAHNQTLIDREI
EVLVDGISDESDLLLQGRWYGQAPEIDGSVYLADGTAQPGDIVRAVVTDCAEYDLAASIL
EPAGRP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatccccctccgcatcggcgcccaccgcccaggatccgggggcggcccccgcg
gtcgcgccccgcaaggtgttcttcgtctccctcggctgccccaagaaccgggtcgacacc
gaggtcatgctcggccacgcaggcggcgccggctaccgcatcgtcgccgagcccgacgag
gccgacgtcatcgtggtcaacacctgcgggttcatcgaggcggccaaagaggagagcgtg
gacaccatcctcgagatggccgagtacaagaagcaaaactgcgaggcgctggtggtcacc
ggctgcctgtcgcagcgctaccccgaggagctcgcggccgagatccccgagatagaccac
ctgctcggatcggccgattttcgccagctcaatagcgccttgggtagcgcgctcagcgcc
aaggccggcgccagcccggcgcgtccggcgcgcagctcgctgcccgtcatccaggtgagc
gagaccccgagcgacctctacgaccacaccacgccgcgcatgcgcagcggcgccctgcac
agcgcctacctcaagatcgccgagggctgcgaccgcccgtgcagcttctgcatcatcccc
aagctgcgcgggccgcagcgcagccgctcgatcgattcggtggtcgccgagaccgaggcc
ctggtggccggcggcgcccgcgagatcaatctcatcgcccaggacctcacccgctacggc
gccgacctgccggcgggaccggacgggcgtccgaatttggccggcctgctgcggcgcgtg
gcgcgcgtgcccggcgtgcgctgggtgcgcctgcactacacctatcccagcgcgttcacc
gacgagctcatcgaggtcatcgccgaagagcccacggtggtcaagtacatcgatgtgccg
ctgcagcacatcgacgacgagatgctcaagcgcatgcgccgcggccacagcgcccgcgtc
acccacgagctggtggccaagctgcgccagcgcatcgacggcctggtgctgcgcacgacc
ttcatcgtcggacacccgggcgaaaccgacgagtccttcggccgcctgctcgacttcgtg
cgcgagacccgcttcgagcgcgtgggcgcctttacctactcgatcgagcccggcacggtc
tcgggcatgctgcccaatcgggtgccgcccgaggtcgccgaggcccgccgcgacgagctg
atggcgctgcagtccgagatccaccgcgcgcacaaccagacgctgatcgaccgcgagatc
gaggtgctggtcgacggcatctcggacgagagcgatctgctgctgcagggccgctggtac
gggcaggcgcccgagatcgacggcagcgtgtacctcgccgacggcaccgcgcagccgggc
gacatcgtccgcgccgtggtcaccgattgcgccgagtacgacctcgcggcgtcgatcctc
gagcccgccggtcgcccgtga
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