Glaesserella parasuis KL0318: JT17_01100
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Entry
JT17_01100 CDS
T03312
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
hpak
Glaesserella parasuis KL0318
Brite
KEGG Orthology (KO) [BR:
hpak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpak03016
]
JT17_01100
Enzymes [BR:
hpak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
JT17_01100
Transfer RNA biogenesis [BR:
hpak03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JT17_01100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
FAD_binding_2
Pyr_redox_3
NAD_binding_8
Pyr_redox_2
Pyr_redox
FAD_oxidored
HI0933_like
NAD_binding_7
ThiI
Motif
Other DBs
NCBI-ProteinID:
AIK89440
LinkDB
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Position
complement(176320..178323)
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AA seq
667 aa
AA seq
DB search
MSKITFASLNFNQSNTPVSAQFDDIYFSTQDGLAESHYVFQEGNQLWEKWQRHTRSFFVI
AETGFGTGLNFFAVAEKFKAFLAEYPTSPLKRLYFISFEKFPIKAEQLQQIHQHYPQFAD
FSTKLIACWQPRQVGCQRYHFEQIYLDIWFGNLLENLPQLGDYYNNLIDCWFLDGFSPDK
NPEMWNESLYQQMFCLTQAGGSFATFTASSNVRRGLQAVGFEVKKRKGFGKKREMLWGEK
PDNQTENSIRFPYFYQSNQTESDDVAIVGGGIASLAVALSLLERGKQVTLYCKDEQLAKN
ASGNLQGAIYPQLSDDDERNVRFYVHSFDYALQRFKQLDQVVTFEHNFSGVALYAYNDKT
AHKLQKMAEQGWDSELYQLCSAQDLSEKIGLTVQNGGAFIAQGGWLSPVQFVQNAFTLLQ
QRGLKVVLNHQVENPEWFAGKWQWQHQGRTFAHQTLVLANGHLLTDFTQSQGIPLYPVRG
QVSQIPTTEALSKLKCVVCYDGYLTPSSAQQTHCIGASHLRDNADEQFSLVEHEQNIAKL
QQNLTACEWTQQLDFSGNLAKVGIRAAFRDRVPMVGAVPDFEAQKTQYANLYNQFRRREP
IETANCYPNLYLVAGLGSRGLTTAFLLGELLASQICGEPLPLSQDILQGLSTNRTWIRNL
LRGREIT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattacctttgcttctttaaattttaatcaatcaaatacccctgtttcagca
cagtttgatgatatttatttttctacgcaagatgggctggcggagagccattatgtcttt
caagagggtaatcaactttgggaaaaatggcaacgacacacccgatctttctttgtgatt
gccgaaacaggctttgggacagggttgaatttttttgctgtggcagaaaagtttaaggca
tttttagcggaatatccgacttcaccacttaaacggctctattttatctcttttgaaaaa
tttccgataaaagccgaacaattacagcaaattcaccaacattatccgcaatttgcagat
ttttccacgaaacttatcgcttgttggcaacctagacaggttgggtgtcagcgttaccat
tttgaacaaatttaccttgatatttggtttggcaacctattagagaatttgccacaactg
ggcgattattataacaatctgatcgattgctggtttttagatggcttttcgcccgacaaa
aatcctgaaatgtggaacgaaagcctttatcagcaaatgttctgcctaacacaagcgggc
ggatcttttgcgacttttaccgcatcaagcaatgtccgccgtggattgcaagcggtcggt
tttgaggtgaaaaaacgtaaaggtttcggcaaaaaacgtgaaatgctttggggcgagaag
cctgacaatcaaacagaaaacagcattcgctttccttatttttatcaatctaaccaaaca
gagagcgatgatgtggcgattgtcggtggtggtattgcaagccttgccgttgccttgtct
ttgctagaacgtggcaaacaggtcacactttattgtaaagatgaacagttagcaaaaaat
gcgtcaggcaatttacagggggcgatttacccacagttaagcgacgatgatgagcgaaat
gtgcgtttttatgtgcatagctttgattatgcgttgcaacgttttaagcagttggatcaa
gtggtcacatttgaacacaatttttcaggggtggcgttatatgcttataacgataaaacc
gcacacaaactacaaaaaatggcggagcaaggttgggatagtgaactttatcaactctgt
tcagctcaagatttgagtgaaaaaataggcttaacggtacaaaatggtggtgcttttatt
gctcagggcggttggctttcacctgtgcagtttgtacaaaatgcttttaccttattgcaa
caacgaggtttgaaagtggtgttaaaccatcaggtggaaaaccctgagtggtttgcagga
aaatggcaatggcaacatcaagggcgaaccttcgcccatcaaaccttagtgttggcaaac
gggcatttattaactgactttactcaaagtcaaggcattcccctttatcctgtgcgcggg
caagtcagccaaatcccaacgacagaagccttgtcgaagttaaaatgtgtggtttgttat
gatggctatttaacgccgagctcagctcaacagacccattgtatcggggcaagccattta
agagacaatgccgatgaacagttcagtttagtggaacacgagcaaaacattgcaaaactt
cagcagaatttgaccgcttgtgaatggacgcaacagcttgatttttcaggaaatcttgcc
aaagtcggcattcgtgcggcatttcgagatcgtgtgccgatggtgggggctgtgccggat
tttgaagcacaaaaaacgcaatatgctaacttgtataatcaatttcgccgtcgagagccg
attgaaactgccaactgctatccaaatctctatttagtcgcagggcttggctcacgaggt
ttaaccaccgcctttttattgggcgaattattagcgagccaaatttgtggcgaaccgctt
ccccttagccaagatattttgcaagggttaagcacaaatcgaacctggatacggaatttg
ttgaggggaagagagataacataa
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