KEGG   Glaesserella parasuis SH03: JL26_07365
Entry
JL26_07365        CDS       T03301                                 
Name
(GenBank) proline dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
hpas  Glaesserella parasuis SH03
Pathway
hpas00250  Alanine, aspartate and glutamate metabolism
hpas00330  Arginine and proline metabolism
hpas01100  Metabolic pathways
hpas01110  Biosynthesis of secondary metabolites
Module
hpas_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:hpas00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    JL26_07365
   00330 Arginine and proline metabolism
    JL26_07365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hpas03000]
    JL26_07365
Enzymes [BR:hpas01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     JL26_07365
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     JL26_07365
Transcription factors [BR:hpas03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    JL26_07365
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH LuxC DUF5073 DDE_Tnp_ISL3
Other DBs
NCBI-ProteinID: AIK17620
LinkDB
Position
complement(1433383..1436994)
AA seq 1203 aa
MSATSHYHILPQGTAIRPTLSEHYRCDEEQLVKQLIPQARVDEHVEGIKTLTKKLVEKVR
NARQKASGVDALMHEFSLSSEEGVALMCLAEALLRIPDKATADKLIRDKIAKGDWRSHVG
NSPSLFVNAAAWGLVVTGKLVATHSESSLASSLSRLIQKGGEPLIRKGVDVAMRLLGKQF
VTGETIQQAIKNGEKRFAMGYRYSYDMLGEAAFTEQDAKRYYDDYVASIHAVGAVSRGLG
VYKSSGVSVKLSAIHPRYSLAQHKRVIDELYPRLKDLFLLAKQYDIGLNIDAEEADRLEL
SLDLMDRLIADPDLADFAGIGFVVQAYQKRCPYVIDYLIEKARANHRKLMIRLVKGAYWD
SEVKRAQADGAEGYPVFSRKVHTDLNYVVCAKKLLSAQDVIYPQFATHNAQTLSTIYHLA
QGKHFEFQCLHGMGETLYDEVVGSHNLNVQCRIYAPVGSYQTLLAYLVRRLLENGANSSF
VNQIVDENLSIDDLACDPVAKAQITEGTMHPKIPLPVKLFAEQRQNSKGYDLTDAIHLKT
LEAELNQLASRQYRAEPQIAGEKTENLHSRQVHNPANIAEVVGEVIEATENDVAKAFAVA
EQFKAEWQNTSPIVRAEALEKMADLMEANMPQLFDLAVREAGKTLNNAIAEVREAVDFCR
YYAKEVRQNPEGYRNPRGIVVAISPWNFPLAIFVGEVSSALVAGNVVLAKPAEQTSLMAY
YAVSLFHQAGIPEQALQCLTGSGKVIGSALVSDPRVNGVIFTGSTDTAKNINRNLQKSAH
IVPLIAETGGQNAMIVDSSALGEQVVADILNSAFDSAGQRCSALRVLYLQRDVAEHILTM
LKGAMAELKVGRPQNLNTDVGPVIDKVAQERLLNHIDEMKKVAKSCYQVPIDPELSQTGI
FVPPTLLEIEHINQLKHEVFGPVLHVIRFDADNLPQVMADINSTGFGLTSGLHSRIDETV
DLWLESIYAGNLYVNRNTVGAVVGVQPFGGMGLSGTGPKAGGPLYLQRLVNRCEWTLSGL
EGGKPADTSGLLTGIQAVLSGTELQNAQDLIASLSRQSPLGKVFKMQGITGEVNFMQFEA
RPVIAIGNGSLEQQIQALIAVVVSGSRAAVHSNSPLAKQAQHFAGLVIISNDFNSLANLS
GLIVLEPLSLEEKAHYAERTGAILTYVENLDLALSLFPLLHEKAISINTAAAGGNASLMS
EMD
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgtcagctacatctcattatcatattttgcctcaaggtaccgctattcgcccaacgtta
agtgaacactatcgttgtgatgaagagcaactcgtcaaacaacttattccgcaagctaga
gtagatgaacacgtcgaaggcattaaaacgcttactaaaaaactcgttgaaaaagtcaga
aatgctcgtcagaaagccagtggtgttgatgcgttgatgcacgaattttccctgtctagt
gaagagggtgtggcattgatgtgtcttgctgaggcgttattgcgtattccggacaaagcg
acagccgataaattaatccgtgacaaaattgccaaaggggattggcgttcccacgttggc
aatagcccttctctatttgtcaatgcggcagcgtgggggttagttgttacgggtaaactg
gtagctacccacagtgaaagtagtctggcttcttcgctttctcgccttattcaaaaaggc
ggagaaccgcttattcgtaaaggggttgatgtggcaatgcgtttgttaggcaaacaattt
gtgacaggggaaaccattcagcaggcgattaaaaatggcgagaagcggttcgcaatgggg
tatcgttatagctacgatatgttaggtgaggcggcattcacagaacaagatgctaaacgc
tattatgatgattatgttgcttctattcacgctgtgggggcggtttctcgtggtctaggg
gtgtataaatcttccggggtatcggttaagctctcggctattcaccctcgctatagttta
gctcaacacaagcgggtaattgatgaactttatccacgtttgaaagatctgtttttatta
gctaaacagtacgacatcggtttgaacattgatgcggaagaagcggatcgtctagagctt
tctttggatttgatggaccgcttgattgccgatcctgatttagctgactttgctggtatc
ggttttgtggttcaggcgtatcaaaaacgttgtccttatgtgattgattatttgattgag
aaagcccgtgcgaaccaccgtaaattgatgatccgcttagtgaaaggggcttattgggac
agcgaagtaaaacgcgctcaagctgatggtgcagaaggttatcccgtattttctcgtaaa
gtccatacagacttaaactatgttgtttgtgcgaaaaaattattgtcggcacaagatgtg
atttatccgcaatttgctacccataacgctcaaaccctttcaaccatttaccatttagca
cagggtaaacattttgagttccagtgcttacacggaatgggggaaactttgtatgatgaa
gttgttggctcacataatctcaatgttcaatgccgaatttatgcccctgtaggttcttat
caaacgctcttagcatatttggttcgtcgtttattagaaaacggggcgaacagctctttt
gttaatcagattgtcgatgaaaatctcagtattgatgatttagcttgcgatcctgtcgca
aaagcccaaataaccgaaggcacaatgcacccgaaaattccattgccagttaaacttttt
gcggaacaacgtcaaaattctaaaggctatgatttaaccgatgcgatccacttaaaaaca
ttagaagcggaattaaatcaacttgcaagccgacaatatcgtgccgagccacaaattgca
ggcgaaaaaactgaaaatcttcattctcgccaagttcacaaccctgcaaatatcgcagaa
gtggtcggtgaggtgattgaggcaacagaaaatgatgtggcaaaagcctttgcagttgcg
gaacagtttaaagctgagtggcaaaacacgtcccctatagttcgagccgaagcacttgaa
aaaatggcagatttgatggaagcaaatatgcctcagctctttgatttagccgtacgagaa
gctggcaaaaccttaaataatgcgattgccgaagtgcgagaagcggtcgatttctgccgt
tattatgcaaaagaagttcgtcaaaaccctgaaggttatcgcaatccgagaggaattgtt
gttgctattagtccgtggaacttcccgcttgcaatttttgtgggcgaagtctcctcggcc
ttagtggctggtaatgtggtattagctaaacctgcagagcaaacctctttaatggcatat
tatgccgtgagtttatttcatcaagcaggtatccctgagcaagccttacaatgtttaacc
ggtagcggaaaagtgatcggctctgccttagtgagcgatccacgagtaaatggcgtgatt
ttcacaggttcaacggataccgctaaaaacatcaatcgcaatttgcaaaaatcagcccat
atcgtaccgcttatcgctgaaacaggcggacaaaatgcgatgattgtcgatagttctgcg
ttaggtgaacaagtggttgctgatattttaaactcagcctttgattcggcaggacaacgt
tgttctgcattgcgagtgctttatttgcaacgtgatgtcgcagagcatatcctgacaatg
ctcaaaggggcaatggcagagttaaaagtcggcagaccgcaaaatcttaatacagacgtt
ggtcctgtgattgataaagtcgcccaagagcgtctgcttaatcatatcgacgaaatgaaa
aaagtggcgaaatcgtgctatcaagttccgattgatcctgaactgtctcaaactggcatt
tttgtaccgccgacgctactcgaaattgagcatatcaatcaattaaaacacgaggtattt
ggccctgtgctacacgttatccgatttgatgcagataatctaccgcaagtgatggcagac
attaactcgacaggctttggcttaaccagtggcttacatagccgtattgatgaaaccgtg
gatttatggcttgaaagtatttacgcaggcaatctctatgttaatcgaaataccgtaggg
gcagtcgtcggggttcagccatttggcggaatgggattatctggcacagggccaaaagcc
ggtgggccactttacctacaacgcttagttaatcgctgtgaatggacattatcgggttta
gaagggggcaaaccagccgacacttcaggcttactcacaggcatacaagcggtgctttca
ggcacagaattacaaaatgcccaagatcttattgcaagtctttctcgccagtcgccgtta
gggaaagtctttaaaatgcaagggattacaggggaagtaaactttatgcaatttgaagct
cgcccagttattgcgatcggtaatggttcactagagcaacaaattcaagccttgattgcc
gtagtggtgtcgggtagccgtgctgcggtacattctaattcgccactggctaaacaggct
cagcattttgcaggcttagtgattattagcaatgatttcaatagcttagcaaatttaagt
ggcttgattgtgcttgaaccgctttcattagaagaaaaagctcactatgcagaacgcaca
ggggcaattctcacctatgtggaaaatcttgaccttgccctttcattattcccattacta
cacgaaaaagcgatcagcattaataccgctgccgctggtggaaatgcgagtttgatgagt
gagatggattaa

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