KEGG   Glaesserella parasuis ZJ0906: K756_06165
Entry
K756_06165        CDS       T02697                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hpaz  Glaesserella parasuis ZJ0906
Pathway
hpaz03030  DNA replication
hpaz03410  Base excision repair
hpaz03420  Nucleotide excision repair
hpaz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpaz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K756_06165
   03410 Base excision repair
    K756_06165
   03420 Nucleotide excision repair
    K756_06165
   03440 Homologous recombination
    K756_06165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpaz03032]
    K756_06165
   03400 DNA repair and recombination proteins [BR:hpaz03400]
    K756_06165
Enzymes [BR:hpaz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K756_06165
DNA replication proteins [BR:hpaz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     K756_06165
DNA repair and recombination proteins [BR:hpaz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     K756_06165
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     K756_06165
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 16165839
NCBI-ProteinID: AGO16413
UniProt: A0A806J3V3
LinkDB
Position
complement(1158112..1160976)
AA seq 954 aa
MATIAKNPLVLVDGSSYLYRAFHAFPPLTNKQGEPTGAMYGVLNMLKSLIAQVEPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAMIKALGIPLLSIEGVEADDVIGT
LAVQASQAGKHVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELIIDYL
ALLGDSSDNIPGVKGVGEKTAIALLQGIGSMQAIYANLDKVAELSFRGAKTFAPKLEAEK
ETADLSYLLATIKTDVALDVTYDQLVTQPQQRDQLVELFGRYEFKRWLNEVMNDANPVTQ
TSAEKIPNNYQATQAVSSEQKSAPFVKISIDRTAYDCVNSPELFTKWLAKLQMAQLVAVD
TETDNLDAMQANLVGISFGLENGEACYIPLAHKGKITQSTQVDLFGESEAELDEVEALLP
NQLNKADCLVQLKPILENQNIRKIGQNIKYDLTIFARNGIELQGVAFDTMLQSYTLDSTG
RHNMDNLAERYLGHQTIPFEELAGKGKHQLTFDQIELDKATEYAGEDAEITMKLHQLLWS
ELQKTPELVKLFEQIEMPLVSVLSRVERNGVLIDPAKLLAHSVEIEQRLKELETLVHQEA
GEVFNLASTKQLQEILFNKLGLPILKKTPKGAPSTNEEVLEELAQMGHQVPVLLMEHRGL
SKLKSTYTDKLPQMINAQTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEQGRRIRQAF
IARDGYVILAADYSQIELRIMAHLANDANMIKAFAEGKDIHRSTAAEIFGVPLEAVTSEQ
RRSAKAINFGLIYGMSEFGLANQLGISRTDAKKYMELYFQRYPAVQQFMLDIREKAAEKG
YVETLFGRRLYLPEINSSNQMRRKAAERVAINAPMQGTAADIIKVAMIGIDQAVRNCEDI
AMIMQVHDELVFEVKADRVEHYTQLIKAEMEKAIELKVPLIAEVGVGSNWDKAH
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggcaacaattgcaaaaaatccgctcgttttagtggacggttcgtcctatttatatcgt
gcattccacgcatttccccctttaactaacaaacaaggtgagccaacaggggcgatgtat
ggcgtgttgaatatgttaaaaagcctgattgcacaggttgaaccaagccatattgctgtc
gtgtttgatgcgaaagggaaaactttccgtgatgagctgtttgaacagtataaatcccac
cgtccgccgatgcccgatgagcttcgttcgcagatccaacctttgcacgcaatgattaaa
gcattgggtattccgctgttgtcgattgaaggggtggaagctgatgatgtaattggaacg
cttgcagtgcaggcttcacaagcaggtaagcacgttttaatcagtacgggcgataaggat
atggctcaactggtgaacgatcatattatgctgattaacacgatgaacaataccttgtta
gatcgtgaaggggtgattgaaaaatatggcattccgcctgagttgattatcgactattta
gctttattgggcgactcgtccgataatatccccggggtaaaaggtgtgggtgagaaaacg
gcgattgcgttgttgcaaggtattggctcaatgcaagcgatttatgcgaatttagacaaa
gttgcagagttatcatttcgtggggcaaaaacctttgcaccgaaactggaagcagaaaaa
gaaacagccgatctctcttatctattagcgacaatcaaaaccgatgttgctcttgatgtc
acttacgatcagcttgttactcaaccacaacagcgagatcaactggtagaactctttggt
cgttatgaatttaaacgttggctgaacgaagtgatgaatgacgctaaccctgtgacacaa
acgtcagcagagaaaatcccgaacaattatcaagccacacaagcggtcagttcagaacaa
aaatctgcaccttttgtaaaaatttcgatagatcgcaccgcttacgattgcgtgaacagc
cctgagctgtttaccaaatggctggcaaaattgcaaatggcacagcttgtggcggtggat
accgaaacggataatttagatgcaatgcaagcaaatttagtcgggatttcatttggcttg
gaaaatggcgaagcgtgctacattccgttggcgcataaaggcaaaattacacagtcgacc
caagtggatctgtttggtgaaagtgaagcagaactcgatgaagtcgaagcgttactgcct
aaccagttgaacaaggcggactgtttggtacagttaaaaccgattttagagaaccaaaat
atccgcaaaatcgggcagaatatcaaatacgatttaacaatttttgctcgcaacggcatt
gagctacaaggggttgcctttgatacgatgttgcaatcttacaccctagacagcacaggt
cgtcacaatatggacaatttggcagagcgttatttgggacatcaaactattccttttgaa
gagttggcaggtaagggcaaacatcagcttacattcgatcaaattgaactggataaagca
acagaatatgcaggggaagatgccgaaattacaatgaaattacatcaactcttatggtct
gaactacaaaaaacgcctgaattggtgaaactgtttgagcaaatcgaaatgccgttggtg
agcgtactttcccgtgtggaacgaaacggcgtattaatcgatcctgccaaactgttggca
cattcggtagagattgaacagcgtttaaaagagcttgaaacccttgtacatcaagaagca
ggagaagtgtttaaccttgcttccactaagcaactgcaagagattttatttaacaaactc
ggcttaccgattttaaagaaaaccccgaaaggtgcgccatcaaccaacgaagaagtgttg
gaagaactggctcaaatgggacaccaagtgcctgtgctgttgatggaacatcgtggcttg
agcaagctgaaatcgacctataccgataaactaccgcagatgattaatgcacaaacagga
cgtgtgcatacttcatatcatcaagcggtcacggcaacagggcgactttcatcaagcgat
ccgaatttacaaaacattccgatccgcaacgagcagggcagacgtatccgtcaagccttt
attgcccgtgatggctatgtgattttggcggcggactattcgcaaattgagttacgcata
atggctcatcttgctaatgatgcaaatatgatcaaagcctttgccgaaggtaaagatatt
caccgttctacggcggcggaaatttttggcgtgccgttggaagcggtgaccagtgaacaa
cgccgtagtgccaaggcgattaacttcggcttgatttacggaatgtctgaatttggcttg
gcaaatcaactgggcatttctcgtaccgatgcgaaaaaatatatggaactttacttccag
cgttatcctgcggtgcaacagtttatgttagacattcgtgaaaaagccgctgaaaaaggc
tatgtcgaaaccctatttggtcgccgtttatatttgcctgaaattaactcaagcaaccaa
atgcgacgcaaagcggcagaacgtgttgccatcaacgccccaatgcaaggcacggcggca
gatattatcaaagtggcaatgatcgggatcgatcaagcggtgcgaaactgtgaagatatt
gcaatgattatgcaagtacacgatgaattagtctttgaagtcaaagccgacagagtagag
cattacacccaactgattaaagccgaaatggaaaaagcaattgagcttaaagtaccattg
attgcggaagttggagttggaagcaattgggataaggcgcattga

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