Helicobacter pylori B38: HELPY_1163
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Entry
HELPY_1163 CDS
T00950
Symbol
rfaF
Name
(GenBank) ADP-heptose-LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
hpb
Helicobacter pylori B38
Pathway
hpb00540
Lipopolysaccharide biosynthesis
hpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HELPY_1163 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpb01005
]
HELPY_1163 (rfaF)
Enzymes [BR:
hpb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
HELPY_1163 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
hpb01005
]
Core region
HELPY_1163 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Imm43
Motif
Other DBs
NCBI-ProteinID:
CAX29815
UniProt:
C7C096
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All DBs
Position
1166837..1167886
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AA seq
349 aa
AA seq
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MSVNVPKRMRILLRLPNWLGDGVMASSLFYTLKHHYPNAHFILVGPQITCELFKKDEKIE
AVFIDDTKKSFFRLLSTYKLAQKIGRCDIAITLNNHFYSAFLLYATKTPIRIGFAQFFRS
LFLSHAIAPAPKEYHQVEKYCFLFSQFLKKELDQKSVLPLKLAFNLPTHTPNTPKKIGFN
PSASYGSAKRWPASYYAEVSAVLLEEGHEIYFFGAKEDAIVSEEILKLIKGLLKNPLLFH
NAYNLCGKTSIEELIERIAILDLFITNDSGPMHAAASMQTPLIALFGPTDEKETRPYKAQ
KAIVLNHHLSCAPCKKRVCPLKNEKNHLCMKSITPLEVLQAAHTLLEES
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaaatgtgcccaaacgcatgcgtattttattgcgtttgcctaattggttaggc
gatggggtgatggcaagctcgctcttttacacccttaaacaccactaccctaacgcgcat
tttatcttagtgggtccacaaatcacttgcgaacttttcaaaaaagatgaaaaaatagaa
gccgttttcatagacgacaccaaaaaatcctttttcaggctgctatccacttacaaactc
gctcaaaaaatagggcgttgcgatatagcgatcaccttaaacaaccatttttattccgct
tttttgctctatgcgacaaaaacgcctattcgcatcggttttgctcaattttttcgttct
ttgtttctcagccatgcgatcgctcctgcccctaaagagtatcatcaagtggaaaagtat
tgctttttattttcgcaatttttaaaaaaagaattggatcaaaaaagcgttttaccctta
aaattggcctttaacctccccactcacaccccaaacacccctaaaaaaatcggctttaac
cctagcgcaagctatgggagcgctaaaagatggccggcttcttattacgctgaagtttct
gctgttttgttagaagaagggcatgaaatttatttttttggggctaaagaagacgctatc
gtttctgaagaaattttaaaactcatcaaaggtttattaaaaaaccctttattgttccat
aacgcttacaatctgtgcgggaaaaccagcattgaagaattgatagaacgcatcgctatt
ttagatttattcatcactaacgatagcggtcctatgcatgcggctgctagcatgcaaacc
cccttaatcgctctttttggccccaccgatgaaaaagagactcgcccctataaagctcaa
aaagcgatcgtattgaaccaccatttaagctgtgcgccttgcaaaaaacgagtttgccct
ttaaagaatgaaaaaaaccatttgtgcatgaaatctatcacgccccttgaagtccttcaa
gccgctcacactcttttagaagagtcttaa
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