Helicobacter pylori 51: KHP_0473
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Entry
KHP_0473 CDS
T02082
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hpd
Helicobacter pylori 51
Pathway
hpd00540
Lipopolysaccharide biosynthesis
hpd01100
Metabolic pathways
hpd01250
Biosynthesis of nucleotide sugars
Module
hpd_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KHP_0473 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpd01005
]
KHP_0473 (rfaD)
Enzymes [BR:
hpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KHP_0473 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hpd01005
]
Core region
KHP_0473 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
KR
Ldh_1_N
FCSD_central
Motif
Other DBs
NCBI-ProteinID:
ACX97681
LinkDB
All DBs
Position
499979..500971
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AA seq
330 aa
AA seq
DB search
MRYIDDELEDQTILITGGAGFVGSNLAFYFQENHPKAKVVILDKFRSNTLSSNNRPSSLG
HFKNLIGFKGEVVIADINNPLDLRRLEKLHFDYLFHQAAISDTTMLDQELVMKTNYQAFL
NLLEIARQKKAKVIYASSAGVYGNTKAPNVVGSNESPENVYGFSKLCMDKFVLSHANDNI
QVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANV
KAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPYAFFQNHTQAHIEPTIL
DLDYTPLYDLESGIKDYLPHIHAIFKEQHA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatattgatgatgaattagaagatcaaacgattttaatcaccggtggggctggc
tttgtgggcagtaatctggccttttattttcaagagaaccaccctaaggctaaagtggta
attttggataagtttcgcagtaacacactctctagtaataatcgccccagttccttaggg
cattttaagaatttaatcggttttaagggtgaggtggttatagctgatattaataacccc
ttagatttaaggcgtttagaaaaattgcattttgattatttgttccaccaagccgctatc
tctgatacgaccatgttggatcaagaattagtgatgaaaaccaactaccaagctttttta
aaccttttagaaatcgctcgccaaaaaaaggctaaagtgatttacgcttcttcagcgggc
gtttatggcaacaccaaagcccccaatgtggtaggctcaaacgaaagccctgaaaatgtt
tatggcttttccaagctttgcatggataaatttgtcctctctcatgcaaacgacaatatt
caagtgggcttaaggtattttaatgtctatgggcctagggaattttataaagaaaaaacc
gcttctatggttttgcaactcgccttaggcgcaatggcgtttaaggaagtcaaacttttt
gaatttggcgagcaattaagggattttgtctatattgaagatgtgattcaagcgaatgtg
aaagcgatgaaggctcaaaaaagcggggtttataatgtgggttattcccaagccagaagt
tataatgaaatagttagcattttaaaagagcatttaggggattttaaagtaacttatatc
aaaaacccttatgctttcttccaaaatcacacccaagcgcatattgaacccactattttg
gatttagactacacccctttatacgatttagaaagcggtattaaagattatttgccccat
atccatgcgatttttaaagaacagcatgcatga
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