KEGG   Helicobacter pylori 908: hp908_0059
Entry
hp908_0059        CDS       T01893                                 
Name
(GenBank) Proline dehydrogenase/Proline oxidase/Delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
hpi  Helicobacter pylori 908
Pathway
hpi00250  Alanine, aspartate and glutamate metabolism
hpi00330  Arginine and proline metabolism
hpi01100  Metabolic pathways
hpi01110  Biosynthesis of secondary metabolites
Module
hpi_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:hpi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    hp908_0059
   00330 Arginine and proline metabolism
    hp908_0059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hpi03000]
    hp908_0059
Enzymes [BR:hpi01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     hp908_0059
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     hp908_0059
Transcription factors [BR:hpi03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    hp908_0059
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: ADN79191
LinkDB
Position
complement(54591..58148)
AA seq 1185 aa
MQKIIEDSLELAKKLQDSISSHLSEQEKAFHSKMQKLLNNPENKVMLIELMDRSFRCLDN
KARFEMIEHVLDKYKSREIFSSFEKWLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLD
QEESQLKERILKRKNEKIILNVNFIGEEVLGEEEANARFEKYSQALKSNYIQYISIKITT
IFSQINILDFEYSKKEIVKRLDALYALALEEEKKQGMPKFINLDMEEFRDLELTVESFME
SIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIAS
MKDWALPTFSNKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHALNDP
VVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNF
MKAFFNLKVGTSEWKDQEQRFLNSLKGIATLDNTTHRTQDRNAKQTGHTTYPNHSFKNES
DTDFILKANREWAKKVREKMHNAPILELYPEIDGRFEYPNLTPLEVFDKIHHKKIASVHL
ADKEAILKALEVAKSDKSHFSQKSFTEIHALLSQTAQIFRERRGDLVGISALEVGKTFAE
TDAEVSEAIDFLEFYPYSLRVLQEQNEKTQFTPKGVGVVIAPWNFPVGISVGTIAAPLAA
GNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLKDKSIQFAILTG
GEDTAYKMLEANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLL
VLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGTLADKPNEKVVKAMDELKSYENYE
IPASFVDDNPYLMKPSIKYGTKKGDFTHQTELFTPILSVMKAQNLDEAIEIVNSTGYGLT
SALESLDEREWEYYLERIEAGNIYINKPTTGAIVLRQPFGGIKKSAVGFGRKVGIFNYIT
QFVNIYQEEEDENALKNPLSEALEGLIQKGYDEHTHELKCAIFMAKSYAYHYKHEFSQAK
DYVKIRGEDNLFSYTKVKSVGYRITEKDTLSDMLGVALACLISQIPLTISAENERANKDL
TFFLECLKTLQANTPIVYESLQKFSEKLHAFNRIRYLKSDLDLLHKQASSLGMVLATAKP
CLNGRFELLYYHLERSVSISYHRYGNLGSRVLRQPTCHKSCCAEK
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcattgaggattcattagaattagctaaaaaactgcaagatagtatcagt
agtcatttgagcgagcaagaaaaagcgttccactctaaaatgcaaaagcttttaaacaac
cccgaaaacaaagtcatgctcatagagcttatggatcggagttttaggtgcttggacaat
aaagcccgctttgaaatgattgagcatgttttagacaaatacaaaagccgtgagattttt
tcttcgtttgaaaaatggcttttaatggggtttttaagctttgggaaaatgctgcctgat
atgagcgttcctttctttgtcaataaaatcagaagcgacacgaaagcaatggtcttggat
caagaggagagccaattgaaagagcggattttaaaaagaaaaaatgaaaaaatcattttg
aacgtgaattttattggcgaggaagttttaggcgaagaagaagctaatgcgcgttttgaa
aaatactctcaagccctaaaatctaactacatccaatacatttccattaaaatcacgacg
attttttctcaaatcaatatccttgattttgaatactctaaaaaagagattgtcaaacgc
ttagacgctctttacgctttagctttagaagaggaaaaaaagcaaggcatgcctaaattc
atcaacttggatatggaggaatttagggatttagagctaacagtggagtcgtttatggag
tctatcgctaaatttgatttgaacgccggtattgtgttgcaagcttatatccctgattct
tatgaatatttgaaaaaactgcatgctttttctaaagaaagggttttaaaagggttaaag
cccattaaaatccgctttgttaagggagcaaacatggagagcgaagagactatcgcttct
atgaaagattgggcgttacccacattttccaataaacaagacaccgactctaattacaac
aaaatgctggattttgttttagagggcgataattataaatatattcatatcggcgcagcg
agccacaatatttttgaaatcgcctatgtctatacgcgcatccatgcccttaatgaccct
gttgtgttagagcatttcagctttgaaatgctagagggcatgagcttgcaagcgagccag
gaattaaaagagatgcacaaactcatcctttatgcgccggtgtgcgatgaagcgcatttc
aacaatgcgatcgcttacttggtgaggaggctagatgaaaacacctcaagcgataatttc
atgaaagctttcttcaacctcaaagtaggcacgagcgaatggaaagaccaagaacaacgc
ttcttaaacagccttaaaggaatcgctactttagacaataccacccacaggactcaagac
agaaacgccaaacaaaccggccataccacttacccaaaccactcctttaaaaacgaaagc
gataccgattttattttaaaagccaaccgagagtgggctaaaaaagtgcgcgagaaaatg
cataacgcccctattttagagctttacccagaaatagatgggaggtttgaatatcctaat
ttaacccctttagaagtctttgataaaatccatcataaaaaaatcgccagcgtgcattta
gcggataaggaagcgattttaaaagccctagaagtggctaaaagcgataagagccatttc
agccaaaaaagcttcacagaaatccatgctttattgagtcaaaccgcccagatttttaga
gaaaggagaggcgatttagtagggatttccgctttagaagtgggtaagactttcgctgaa
acggacgctgaagtgagcgaagccattgactttttagagttttacccttacagcttaaga
gtgttacaagagcaaaatgaaaaaacgcaattcacccccaaaggcgtgggcgtggtcatc
gccccatggaatttccctgtgggcatttctgtaggcactatcgctgcccccctagccgct
ggcaatcgggtgatttacaagccatcaagtttgtctagcgtgaccggttataagctttgt
gagtgcttttgggatgcgggcgtgcctagagatgcgctcatttacttgccctctaaaggg
agcgatattagcgagcatcttttgaaagataaaagcatccagtttgccattttaaccggg
ggcgaagacaccgcttataagatgctagaagctaaccccactttagccttgagcgctgaa
acgggcggtaaaaacgccaccattgtgagcaaaatggcagacagagaccaagcgatcaag
aacgttatccattcagcttttagcaattcggggcaaaaatgctccgccacttcgctttta
gtgttggaaaaagaagtctatgaagatgagaatttcaaaaagactttgatagacgcgact
ctaagccttagcgtgggcgatccttttgatttcaaaaacaaaatcggcactctagcggac
aagcctaatgaaaaggtcgtcaaagccatggatgaattgaaaagctatgaaaattacgaa
atcccggcaagctttgttgatgataacccctatttgatgaagccaagcatcaaatacggc
actaaaaaaggcgatttcacgcaccaaactgagctttttacgcccattttatccgtgatg
aaagcgcaaaatttagacgaagcgatagaaatagtcaattctaccggttacgggctgact
agcgcgttagagtctttggatgaaagggagtgggaatactatttagaacgcattgaagcc
ggtaatatctatatcaacaagcccaccacaggagcgatcgttttacgccagccttttggg
gggattaaaaaatccgctgtggggtttgggaggaaggtaggcattttcaactatatcacg
caatttgtgaatatctatcaagaagaagaagatgaaaacgccttaaaaaaccccttaagc
gaagctttagagggcttgattcaaaaaggctatgacgaacacacgcatgaattaaagtgc
gcgatttttatggcaaagagctacgcctatcattataaacatgaatttagccaagctaaa
gactatgtcaaaatcagaggcgaagacaatctcttttcctacactaaagttaaaagcgtg
ggctatcgcatcaccgaaaaggacaccttaagcgacatgttgggcgtggctttagcatgc
ctcatttctcaaatccctttaacaatcagtgcagaaaacgaacgagcgaacaaggatcta
acatttttcttagaatgcttaaaaacgctccaagcaaacacccctatcgtttatgaaagc
ttgcaaaaattcagcgagaaattgcatgctttcaatcgtatccgttatttaaaaagcgat
ttggatttattgcacaagcaagcaagctccttagggatggttttagccacagctaaaccc
tgcttgaacgggcgttttgaattgctgtattaccacttagagcgatcggttagcatttct
tatcatcgttacgggaatttaggctcaagggttttaaggcaacccacttgccacaaatca
tgttgtgctgaaaaataa

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