KEGG   Helicobacter pylori 35A: HMPREF4655_20102
Entry
HMPREF4655_20102  CDS       T01892                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
hpo  Helicobacter pylori 35A
Pathway
hpo00740  Riboflavin metabolism
hpo01100  Metabolic pathways
hpo01110  Biosynthesis of secondary metabolites
hpo01240  Biosynthesis of cofactors
hpo02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hpo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    HMPREF4655_20102 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HMPREF4655_20102 (ribD)
Enzymes [BR:hpo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     HMPREF4655_20102 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     HMPREF4655_20102 (ribD)
SSDB
Motif
Pfam: dCMP_cyt_deam_1 RibD_C
Other DBs
NCBI-ProteinID: ADU40272
LinkDB
Position
complement(93747..94781)
AA seq 344 aa
MKLYESLLEICLNKAWEHQTLALENPSVACMVLDKNHEILSLETHKKAKTPHAEVLAAKS
ALKILRPGLKNDLEKLEDPKTLSDFLKTHHDNAFKDCVFLITLEPCNSYGKTPACSGLLE
ILKPKRVVIATEENEAKKGGLARLQKARIDGVVCESLENKAKDLLLPFRIMEQKGRFNLF
KLALRMNGDYYHGKITGQKSVVFTHNQRAVCDTLIVSGKTIRTDNPLLDARFCDSFYQNK
NPNIAILSKHSIDPNSKVFSAPNRLVNAFYDPKDLPLEKGFNFIEGGWELFESLRDKIDA
LLLHSHASMISEAFNTIALKNPFKGRLLHAQILENEALLWIENS
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaaactttatgagagtttgttagaaatttgcttgaataaggcatgggagcatcaaacc
ctagccctagaaaacccaagcgtggcttgcatggtgctggataaaaaccatgaaatcttg
agtttagaaacccacaaaaaagccaaaaccccgcatgcagaagtcttagccgctaaatca
gcgttaaagattttacgccccggtttaaaaaacgatttagaaaaattagaagaccctaaa
actttaagcgattttttaaaaacacaccacgataacgcttttaaagactgcgttttttta
atcaccctagagccatgcaattcttatggcaaaaccccggcgtgcagcgggttgttagaa
attttaaaacctaaaagagtggtcattgccacagaagaaaacgaagctaaaaaagggggt
ttagcaaggctacaaaaggctcgtattgatggggtggtttgtgagagtttggaaaacaag
gctaaagacttgctcttgccttttaggataatggaacaaaaggggcgttttaatttgttc
aaactcgctttaagaatgaatggggattattatcatggcaagatcaccgggcaaaaaagc
gttgtttttacgcacaaccagcgagcagtatgcgacacgcttattgtttctgggaaaacc
ataagaacggataaccccttattagacgctcgcttttgcgatagcttttatcaaaataaa
aaccccaatatcgctattttatccaagcactcaattgaccccaattcaaaggttttttct
gctcctaatcgtttggttaatgctttctatgaccctaaagatttgcccctagagaagggg
tttaatttcattgaaggggggtgggaattgtttgagagtttgagggataaaatagacgca
ttgcttttgcattcgcatgcgtctatgattagcgaagcgtttaacacgatcgctctaaaa
aacccttttaaagggcggttgttgcatgcgcaaatcttagaaaatgaagcccttttatgg
atcgaaaactcttaa

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