Helicobacter pylori 35A: HMPREF4655_20866
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Entry
HMPREF4655_20866 CDS
T01892
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hpo
Helicobacter pylori 35A
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpo03009
]
HMPREF4655_20866 (rimO)
Enzymes [BR:
hpo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HMPREF4655_20866 (rimO)
Ribosome biogenesis [BR:
hpo03009
]
Prokaryotic type
ribosomal protein modification factors
HMPREF4655_20866 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Rotavirus_VP3
CLP1_P
DUF2981
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
ADU40978
LinkDB
All DBs
Position
836484..837803
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AA seq
439 aa
AA seq
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MQIKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDTKSADVILINTCGFIESAKQES
IQTILNAAKDKKKGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVE
DLALKGYTDMTFIAQDSSSFLYDKGQKDGLIQLIKAIDKQQVLKSARILYLYPSSTTLEL
IGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLDAMKQVKESFIRSTIIVG
HPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNNSFKALLNKPIKALVENKEGEYFYKARDLRWAPEVDGEILINDSELATPLKPGHYT
IMPSAFKDNILLAKVLSPF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaagaaaacaaacaactctgcttaatttcattaggttgctctaaaaatttg
gtggattcagaggtgatgttaggcaagctttataactacacgctcactaatgacactaag
agcgctgatgtgattttgatcaacacttgcggttttattgaaagcgccaaacaagagagc
atccaaaccattctaaacgccgctaaagacaaaaaaaagggggcgattttgattgcgagc
gggtgcttgagcgagcgctataaagatgaaatcaaagaattgatccctgaagtggatatt
tttaccggtgtgggggattatgacaagattgatataatgatcgctaaaaaacaaaaccag
ttcagcgagcaagtgtttttgagcgagcattataacgcgcgcatcatcacgggatcgagc
gtgcatgcgtatgttaaaatttctgagggttgcaatcaaaaatgctctttttgcgctatc
cctagctttaaggggaaattacaaagcagggaattagactccattttaaaagaagtagaa
gatctcgcgcttaaaggctatacggatatgacttttatcgctcaagactctagctccttt
ttatacgataaggggcaaaaagacggcttgatccagctcatcaaggcgattgacaaacag
caagtcttaaagagcgctcgcattttatacctctacccctctagcaccacgctagagctt
attggtgcgattgaaagttcgcccatttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgcttaaaaaaatgcggcgcaactctagccaagcgcaccatttaaag
cttttagatgccatgaagcaggttaaagaaagctttatcagaagcacgatcattgtaggg
catccggaagaaaatgagggcgaatttgaggaattgagcgcgtttttggacgagttccgg
tttgaccggttgaatatttttgctttcagtgctgaagaaaacacacatgcctattcttta
gagaaagtgcctaaaaaaatcattaacgctcgcatcaaagccttgaataaaatcgctcta
aaacaccagaacaattcctttaaggctttgttgaataagcccattaaggcgttagtggaa
aataaagagggcgagtatttttacaaagcaagggatttgagatgggcacctgaagtggat
ggggaaatcttaatcaatgacagcgaactagccacccctttaaaacccgggcattatacg
attatgcctagcgcatttaaagacaatatcttactcgctaaggttttaagccctttttaa
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