KEGG   Helicobacter pylori Shi470: HPSH_00275
Entry
HPSH_00275        CDS       T00742                                 
Name
(GenBank) Proline/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
hps  Helicobacter pylori Shi470
Pathway
hps00250  Alanine, aspartate and glutamate metabolism
hps00330  Arginine and proline metabolism
hps01100  Metabolic pathways
hps01110  Biosynthesis of secondary metabolites
Module
hps_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:hps00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    HPSH_00275
   00330 Arginine and proline metabolism
    HPSH_00275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hps03000]
    HPSH_00275
Enzymes [BR:hps01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     HPSH_00275
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     HPSH_00275
Transcription factors [BR:hps03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    HPSH_00275
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: ACD47522
LinkDB
Position
complement(51359..54916)
AA seq 1185 aa
MQKIIDDSLELAKKLQDSISNHLSEQEKAFHSKMQKLLNNPENKVMLIELMDRSFRCLDN
KARFEMIEHVLDKYKSREIFSSFEKLLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLD
QEESQLKERILKRKNEKIILNVNFIGEEVLGEEEANARFEKYSQALKSNYIQYISIKITT
IFSQINILDFEYSKKEIVKRLDALYALALEEEKKQGMPKFINLDMEEFRDLELTVESFME
SIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIAS
VKDWALPTFSNKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHALNDP
VVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNF
MKAFFNLKVGTSEWKDQEQRFLNSLKGIATLDNATHRTQDRNAKQSGHTTYPNHSFKNES
DTDFILKANREWAKKVREKMHNAPILELYPEMDGRFEDPNLTPLEVFDKIHHKKIASVHL
ADREAILKALEVAKSDKSRFSQKSFTEIHALMSQTAQLFRERRGDLIGISALEVGKTFAE
TDAEVSEAIDFLEFYPYSLRVLQEQNKKTKFTPKGVGVVIAPWNFPVGISVGTIAAPLAA
GNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLKDESIKFAILTG
GEDTAYKMLEANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLL
VLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGALADKPNEKVIKAIDELKSYENYE
IPVSFVNDNPYLMKPSIKYGTKKGDFTHQTELFTPILSVMKAQDLDEAIDIVNSTGYGLT
SALESLDEREWEYYLERIEAGNIYINKPTTGAIVLRQPFGGVKKSAVGFGRKVGIFNYIT
QFVNIHQEEEDENALKNPLSEALEGLTQKGYDEHTHELKRAIFMAKSYAYHYKHEFSQAK
DYVKIRGEDNLFSYTKVKSVGYRITEEDTLSDMLGVALACLIPQIPLTLSIENERANKDL
SFFLECLKALRANAPIVYESLQKFSEKLNAFNRVRYLKSDLDLLHEQASRLGIVLATAKP
CLNGRFELLYYHLERSVSISYHRYGNLGSRVLRRPTCHKSCCAEK
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcattgacgattcgttagaattagccaaaaaactgcaagatagtatcagt
aaccatttgagcgagcaagaaaaagcgttccactctaaaatgcaaaagcttttaaataac
cctgaaaacaaggtcatgctcatagaacttatggatcggagttttagatgcctggacaat
aaagcccgctttgaaatgattgagcatgttttagacaaatacaaaagccgtgagattttt
tcttcgtttgaaaaattgcttttaatggggtttttaagctttgggaaaatgctccctgat
atgagcgtgcctttctttgtcaataaaatcagaagcgacacgaaagcgatggtcttggat
caagaagaaagccaattaaaagagcggattttaaaaagaaaaaatgaaaaaatcattttg
aatgtgaattttattggcgaagaggttttaggcgaagaagaagctaatgcgcgttttgaa
aaatactctcaagccctaaaatccaactacattcaatacatttccattaaaatcacaacg
attttttctcaaatcaatatccttgattttgaatactctaaaaaagagattgtcaaacgc
ctagacgctctttatgccttggctttagaagaagaaaaaaagcaaggcatgcctaaattt
attaatttggatatggaggaatttagggatttagagctcacggtggagtcttttatggag
tctatcgctaaatttgatttgaacgctggtattgtgttgcaagcctatatcccggattct
tatgaatatttgaaaaaactgcacgctttttctaaagaaagggttttaaaagggttaaag
cccattaaaatccgttttgttaagggagcgaacatggagagcgaagagactatcgcttcc
gtgaaagactgggcgttacccacattttccaataagcaagacaccgattctaattacaat
aaaatgctggattttgttttagagggcgataattataaatacattcatattggcgcagcg
agccataatatttttgaaatcgcttatgtctatacgcgcatccatgcccttaatgaccct
gttgtgttagagcattttagctttgaaatgctagagggcatgagcttgcaagcgagccag
gaactaaaagagatgcacaaactcattctttatgcgccggtgtgcgatgaagcgcatttt
aacaatgcgatcgcttacttggtgagaaggttagatgaaaacacctcaagcgataatttc
atgaaagctttctttaacctcaaagtaggcacgagcgaatggaaagatcaagaacaacgc
tttttaaatagccttaaaggaatcgctactttagacaatgccacccacaggactcaagat
agaaacgccaaacaaagcgggcataccacctacccaaaccactcctttaaaaacgaaagc
gataccgattttattttaaaggccaaccgagaatgggctaaaaaagtgcgcgaaaaaatg
cataatgcccctattttagagctttacccagaaatggatgggaggtttgaagatcctaat
ttaacccctttagaagtctttgataaaatccatcataaaaaaatcgctagcgtgcattta
gcggatagggaagcgattttaaaagccctagaagtggctaaaagcgataagagccgtttc
agccaaaaaagctttacagaaatccatgccttaatgagtcaaaccgcccagctttttaga
gaaaggcgaggcgatttgatagggatttcggctttagaagtgggtaagactttcgctgaa
acggacgctgaagtgagcgaagccattgactttttagagttttacccttacagcttaagg
gtgctacaagagcaaaataaaaaaacgaaattcacccccaaaggcgtgggtgtggtcatt
gccccatggaatttccctgtgggcatttctgtaggcactatcgctgcccccctagccgct
ggcaatcgggtgatttacaagccctcaagtttgtctagcgtaacgggttataagctttgc
gagtgtttttgggatgcgggcgtgcctagagatgcgctcatttacttgccctctaaaggg
agcgatattagcgagcatcttttaaaagatgaaagcatcaagtttgccattttaacaggg
ggcgaagacaccgcttataaaatgctagaagctaaccccactttagccttgagcgctgaa
acaggcggtaaaaacgccactattgtgagcaaaatggcagacagagatcaggcgattaag
aatgtcatccattcagcttttagcaattcggggcaaaaatgctccgccacttcgctttta
gtgttggaaaaagaagtctatgaagatgagaactttaaaaagactctaatagatgcgact
ctaagccttagcgtgggcgatccttttgatttcaaaaacaaaatcggcgctctagcggac
aagcctaatgaaaaggtcatcaaagccatagacgaattgaaaagctatgaaaattacgaa
atcccggtaagctttgtcaatgataacccctatttgatgaagccaagcatcaaatacggc
actaaaaaaggcgatttcacgcaccaaactgagctttttacgcccattttatccgtgatg
aaggcacaagatttagacgaagcgatagacatagtcaattctaccggttacgggctgacg
agcgcgttagagtctttggacgaaagggagtgggaatattatttagaacgcattgaagcc
ggtaatatctatatcaacaaacccaccacaggagcgattgtcttacgccagccttttggg
ggggttaaaaaatccgctgtggggtttgggagaaaggtgggcatttttaactatatcacg
caatttgtgaatatccaccaagaagaagaagatgaaaacgccctaaaaaaccccttaagc
gaagctttagaaggcttgactcaaaaaggctatgatgaacacacgcatgagttgaagcgc
gcgatttttatggcaaagagctacgcttatcattacaagcatgaattcagccaagctaaa
gactatgtcaaaatcagaggcgaagacaaccttttttcctacactaaagttaaaagcgtg
ggctatcgcatcaccgaagaagacactttaagcgatatgttaggcgttgctttggcatgt
ttaattcctcaaatccctttaacgctcagcatagaaaacgaacgagcgaacaaagattta
tcatttttcttagaatgtttaaaagcgctccgagcaaacgcccctattgtttatgaaagc
ttgcaaaaatttagcgagaaattgaacgctttcaatcgtgtccgttatttaaaaagcgat
ttggatttattgcatgaacaagcgagcagattagggattgttttagccacggctaaaccc
tgcttgaacgggcgttttgaattgctgtattaccacttagagcgatcggttagcatctct
tatcatcgttacgggaatttaggctcaagggttttaaggcgaccaacttgccacaaatca
tgttgtgctgaaaaataa

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