Helicobacter pylori Shi470: HPSH_02515
Help
Entry
HPSH_02515 CDS
T00742
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase (rfaD)
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hps
Helicobacter pylori Shi470
Pathway
hps00540
Lipopolysaccharide biosynthesis
hps01100
Metabolic pathways
hps01250
Biosynthesis of nucleotide sugars
Module
hps_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPSH_02515
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hps01005
]
HPSH_02515
Enzymes [BR:
hps01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HPSH_02515
Lipopolysaccharide biosynthesis proteins [BR:
hps01005
]
Core region
HPSH_02515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Ldh_1_N
FCSD_central
Motif
Other DBs
NCBI-ProteinID:
ACD47953
LinkDB
All DBs
Position
484464..485456
Genome browser
AA seq
330 aa
AA seq
DB search
MRYIDDELENQTILITGGAGFVGSNLAFYFQENHPKAKVVVLDKFRNNTLFSNNRPSSLG
HFKNLIGFKGEVVIADINNPLDLRRLEKLHFDYLFHQAAISDTTMLDQELVMKTNYQAFL
NLLEIARSKKAKVIHASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNI
QVGLRYFNVYGPREFYKEKTASMVLQLALGIMAFKEVKLFEFGEQLRDFVYIEDVIQANV
KAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVAYIKNPYAFFQNHTQAHIEPTIL
DLDYTPLYDLESGIKDYLPHIRAIFKEHCA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatattgatgatgagttagaaaatcaaacgattttaatcaccggtggggctggc
tttgtaggcagtaatttggccttttattttcaagagaaccaccctaaagctaaagtggtg
gttttggataagtttcgcaataacacgcttttcagtaataaccgtcccagttccttaggg
cattttaagaatttaatcggttttaagggtgaggtggttatagctgatattaataacccc
ttagatttaaggcgtttagaaaaattgcattttgattatttgttccaccaagccgctatc
tctgatacgaccatgctggatcaagaactagtgatgaaaaccaactaccaggctttttta
aaccttttagaaatcgctcgctcaaaaaaagctaaagtgattcacgcttcttcagcgggc
gtttatggcaacaccaaagcccccaatgtggtaggcaaaaacgaaagccctgaaaatgtt
tatggcttttccaagctttgcatggacgaatttgtcctctctcattcaaacgacaatatt
caagtgggcttaaggtattttaatgtctatgggcctagggaattttataaagaaaaaacc
gcctctatggttttgcaactcgccttaggcataatggcgtttaaggaagtcaagcttttt
gaatttggcgagcaattaagggattttgtttatattgaagatgtgatccaagcgaatgtg
aaagcgatgaaggctcaaaaaagcggggtttataatgtgggttattctcaagccagaagt
tataatgaaatagttagcattttaaaagagcatttaggggattttaaagtagcttatatc
aaaaacccttatgctttcttccaaaatcacacccaagcgcatattgaacccactattttg
gatttggattacacccctttatacgatttagaaagcggcattaaagattatttgccccat
atccgtgcgatttttaaagaacattgcgcatga
DBGET
integrated database retrieval system
