Hydrogenophaga pseudoflava: HPF_08085
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Entry
HPF_08085 CDS
T06073
Symbol
ligB1
Name
(GenBank) Protocatechuate 4,5-dioxygenase beta chain
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00362
Benzoate degradation
hpse00624
Polycyclic aromatic hydrocarbon degradation
hpse00627
Aminobenzoate degradation
hpse01100
Metabolic pathways
hpse01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HPF_08085 (ligB1)
00627 Aminobenzoate degradation
HPF_08085 (ligB1)
00624 Polycyclic aromatic hydrocarbon degradation
HPF_08085 (ligB1)
Enzymes [BR:
hpse01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
HPF_08085 (ligB1)
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
QBM27639
UniProt:
A0A4P6WYF2
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All DBs
Position
1647292..1648170
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AA seq
292 aa
AA seq
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MAKITASVFTSHVPAIGAAMDLGKTQEDYWKPLFAGYEYSKQWMKDNKPDVIFLVYNDHA
TAFSLEMIPTFAIGTAAEFQPADEGWGPRPVPKVIGHPDLASHIAQSVIQQDFDLTIVNK
MDVDHGLTVPLSLMCGELDPKKDAWPCPVIPFAVNVVQYPVPSGKRCFALGQAIRKAVES
FDEDLNVHIWGTGGMSHQLQGARAGLINREWDNNWLDLMINDPVACANVPHIDYVREAGS
EGIELVMWLIARGAMSDVVDGKVVGPAPTVKHRFYHVPASNTAVGHAILENA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcaccgcatccgtcttcacctcgcacgtgcccgccatcggcgcggccatg
gacctgggcaagacccaggaggactactggaagccgctgttcgcggggtacgagtattcc
aagcagtggatgaaggacaacaagcccgacgtcatcttcctcgtctacaacgaccacgcc
acggccttcagcctggagatgatccccaccttcgccatcggcaccgcggccgagttccag
ccggccgacgaaggctggggcccgcgcccggtgcccaaggtcatcggccacccggacctg
gcctcgcacatcgcgcagtcggtcatccagcaggacttcgacctcaccatcgtcaacaag
atggacgtggaccacggcctgaccgtgccgctgtcgctgatgtgcggcgagctcgacccc
aagaaggacgcctggccctgcccggtgatcccgttcgcggtcaacgtggtgcagtacccg
gtgccctcgggcaagcgctgcttcgcgctgggccaggccatccgcaaggcggtcgagagc
tttgacgaggacctgaacgtgcacatctggggcacgggcggcatgagccaccagctgcag
ggcgcgcgcgccggtctgatcaaccgcgagtgggacaacaactggctcgatctgatgatc
aacgacccggtggcctgcgccaacgtgccgcacatcgactacgtgcgcgaggccggcagc
gagggcatcgaactcgtgatgtggctgatcgcccgcggcgccatgtccgatgtggtcgac
ggcaaggtcgtcggcccggcgcccaccgtgaagcaccgcttctaccatgtgcccgcgtcc
aacacggccgtcggtcacgcgattcttgagaatgcataa
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