Hydrogenophaga pseudoflava: HPF_10335
Help
Entry
HPF_10335 CDS
T06073
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpse03009
]
HPF_10335 (rimO)
Enzymes [BR:
hpse01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPF_10335 (rimO)
Ribosome biogenesis [BR:
hpse03009
]
Prokaryotic type
ribosomal protein modification factors
HPF_10335 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QBM28085
UniProt:
A0A4P6X067
LinkDB
All DBs
Position
2117457..2118842
Genome browser
AA seq
461 aa
AA seq
DB search
MSESPVSTSATAPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFAGADIVIVNTCGF
IDDAVKESLDTIGEALAENGKVIVTGCLGAREGDGGGNLVQQMHPSVLAVTGPHATHEVM
EAVHRHLPKPHDPFVDLVPPQGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPV
GDVLTEARKLFEAGVKELLVVSQDTSAYGVDVQYRTGFWDGKPVKTKMLDLVRTLGELAR
GFGAWVRLHYVYPYPHVDDVIPLMAEGLILPYLDVPLQHSHPDVLKRMKRPASGERNLER
IARWREICPEIVVRSTFIVGFPGETEAEFQNLLDFLAEARIDRAGCFAYSPVEGAAANAL
TDPVADAVREERRARFMEVAEAVSADKLRSRVGSTMQVLVDSAPGLGKKGGVGRSYADAP
EIDGVVRLLPPEKISKTLKVGEFTRARIVAADGHDLVAQPI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcccctgtttccaccagcgccacggcgcccaaagtagggtttgtgagtctg
ggttgccccaaggccctcacggactccgaactgatcctcacgcaactgagcgccgagggt
taccagacatccaagacctttgcaggtgccgacatcgtcatcgtcaacacctgtggcttc
attgatgacgctgtcaaggagagcctggacaccatcggggaggctttggccgagaacggc
aaggtgatcgtcaccggctgccttggcgcgcgcgagggcgatggcggtggcaacctggtg
cagcagatgcacccgagcgtgctggcggtgaccggccctcacgccacccatgaggtgatg
gaggcagtgcacaggcaccttcccaagccgcacgatccttttgttgacttggtgccaccc
cagggcatcaagctcactccgcgccattacgcctacctgaagatcagcgagggctgcaac
caccgctgcaccttctgcatcattccgtcgatgcgaggtgatctggtcagtcgtcctgtg
ggtgatgtgctgacagaagcgcgcaagttgtttgaggccggagtcaaggagttgttggtg
gtcagccaggacacatcggcctatggtgtcgatgtgcaataccggactggtttctgggat
ggcaagccagtgaaaaccaagatgctcgatctggttcgcacgcttggtgagttggcaaga
ggatttggcgcatgggtgcgtctgcactacgtgtacccatatccccacgtggacgacgtg
attccgctgatggccgagggtctgatcctgccgtatctggatgtgccactgcagcacagc
catcccgatgtgctcaagcggatgaagcgccccgccagtggggaaagaaatctggaacgc
attgcccgctggcgcgagatctgccctgagatcgtggtgcgcagcaccttcatcgtagga
tttcccggagagacggaggctgagtttcagaatctgctcgatttcttggccgaagcgcgc
attgatcgtgcgggttgctttgcgtactcgccggtggagggggccgcagccaacgcactg
actgatcctgtcgcggatgcggtgcgggaagagcgccgcgcgcgcttcatggaggtcgcg
gaggcggtgtccgctgacaaactgcgctcccgcgtgggctcgaccatgcaggtgctggtg
gattcggcgcccggcctgggtaagaaggggggtgttggccgcagttacgcggatgcgccg
gagatcgatggcgtggtgcgactgctgccaccagagaagatcagcaagacgctcaaggtg
ggggagttcactcgcgcgcgcatcgttgcagcggacggtcacgacctcgtggctcagccg
atttga
DBGET
integrated database retrieval system
