Helicobacter pylori v225d: HPV225_1219
Help
Entry
HPV225_1219 CDS
T01899
Symbol
rfaF
Name
(GenBank) lipopolysaccharide heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
hpv
Helicobacter pylori v225d
Pathway
hpv00540
Lipopolysaccharide biosynthesis
hpv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hpv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPV225_1219 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpv01005
]
HPV225_1219 (rfaF)
Enzymes [BR:
hpv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
HPV225_1219 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
hpv01005
]
Core region
HPV225_1219 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Gin
Motif
Other DBs
NCBI-ProteinID:
ADI35260
LinkDB
All DBs
Position
1199922..1200971
Genome browser
AA seq
349 aa
AA seq
DB search
MSVNAPKRMRILLRLPNWLGDGVMASSLFHTLKHHYPNAHFILVGPQMTCELFKKDEKIE
AVFIDDTKKSFFRLLATHKLAQKIGHCDIAITLNNHFYSAFLLYATKTPVRIGFAQFFRS
LFLSHAIISAPKEYHQVEKYCFLFSQFLKKELDKKSVLPLKLAFNLPTHTPNTPKKIGFN
PSASYGSAKRWPASYYAEVSAALLEEGHEIYFFGAKEDAIVSEEILKLIKGLLKNPLLFN
NAYNLCGKTSIEELIERIAILDLFITNDSGPMHVAASAQTPLIALFGPTDEKETRPYKAQ
KTIVLNHHLICSPCKKRVCPLKNEKNHLCMKSITPLEVLKAAHTLLEKP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaaatgcgcccaaacgcatgcgtattttattgcgtttgcctaattggttaggc
gatggggtgatggcaagctcgctttttcacacccttaaacaccactaccctaacgcgcat
tttatcttagtgggcccacaaatgacttgcgaacttttcaaaaaagatgaaaaaatagaa
gccgtttttatagatgacaccaaaaaatcctttttcaggctgctagccactcacaaactc
gctcaaaaaatagggcattgcgatatagcgatcactttaaacaaccatttttattccgct
tttttgctctatgcgacaaaaacgcctgttcgcatcggttttgctcaattttttcgttct
ttgttccttagccatgcgataatttctgcccctaaagagtatcatcaagtggaaaagtat
tgctttttattttcgcaatttttaaaaaaagaattggataaaaaaagcgttttaccctta
aaactggcctttaacctccccactcacaccccaaacacccctaaaaaaatcggctttaac
cctagcgcaagttatgggagtgctaaaagatggccggcttcttattacgctgaagtttct
gctgctttgttagaagaagggcatgaaatttatttttttggggctaaagaagacgctatc
gtttctgaagaaattttaaaactcatcaaaggcttattaaaaaaccccttattattcaat
aacgcttacaatctgtgcgggaaaacaagcattgaagaattgatagagcgcatcgctatt
ttagatttattcatcactaacgatagcggtcctatgcatgtggctgctagcgcacaaacc
cccttaatcgctctttttggccccactgatgaaaaagaaactcgcccctataaagctcaa
aaaacgatcgtgttgaaccaccatttaatctgttcgccctgcaagaaacgagtttgccct
ttaaagaatgaaaaaaaccatttgtgcatgaaatctatcacgccccttgaagtcttaaaa
gccgctcacactcttttagaaaagccctaa
DBGET
integrated database retrieval system
