Helicobacter pylori 83: HMPREF0462_0267
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Entry
HMPREF0462_0267 CDS
T01915
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hpx
Helicobacter pylori 83
Pathway
hpx00300
Lysine biosynthesis
hpx01100
Metabolic pathways
hpx01120
Microbial metabolism in diverse environments
hpx01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hpx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HMPREF0462_0267 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hpx01002
]
HMPREF0462_0267 (dapE)
Enzymes [BR:
hpx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HMPREF0462_0267 (dapE)
Peptidases and inhibitors [BR:
hpx01002
]
Metallo peptidases
Family M20
HMPREF0462_0267 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AEE69872
UniProt:
F4D406
LinkDB
All DBs
Position
complement(253701..254918)
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AA seq
405 aa
AA seq
DB search
MFCIYTSICEKTLKGFLMDALEITQKLISYPTITPKECGIFEYIKSLFPTFKALECGENG
VKNLFLYRVFNPPKEHIEEKHAKKEHAKENIKPLHFCFAGHIDVVPPGNHWQSDPFKPIV
KEGFLYGRGAQDMKGGVGAFLSASLNFNPKTPFMLSVLLTSDEEGPGIFGTRLMLEKLKE
KDLLPHMAVVAEPTCEKVLGDSIKIGRRGSINGKLILKGVQGHAAYPQKCQNPIDALASV
LPLISGVHLDDGDEYFDPSKLVITNLHAGLGANNVTPASVEVIFNARHSLKTTKESLKEY
LEKVLKSTPYTLELESSSSPFITASHSKLASVLKENILKTCHTTPLLNTKGGTSDARFFS
AHGIEVVEFGVINDRIHAIDERVSLKELELLEKVFLGVLENLSEK
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcatttatacatccatttgcgaaaaaactcttaaaggatttttaatggacgct
ttagaaatcacccaaaagctcatcagctaccccaccatcacgcccaaagaatgcggtatt
tttgaatacattaaatcgctttttcctacttttaaagctctagaatgtggggaaaatggc
gtgaaaaacctttttttataccgggtttttaacccccctaaagagcatatagaagaaaag
catgcaaaaaaagagcatgcaaaagaaaatattaagcccttgcatttttgctttgcaggg
catattgatgtcgtgcctcctggaaatcattggcaaagcgatccctttaaacccattgtt
aaagaggggtttttatacggccgtggggcgcaagacatgaaaggaggcgtgggggcgttt
ttgagtgcgagtttaaattttaaccctaaaacccctttcatgctttctgttttactcaca
agcgatgaagaagggccagggatttttggcactaggcttatgttagaaaaactcaaagaa
aaagatttgctccctcacatggcggttgtggctgaacccacttgcgaaaaagtcctaggc
gatagcatcaaaatcggccgaagaggctctattaatggcaaactcattttaaaaggcgtt
caagggcatgcggcttacccacaaaaatgccaaaaccccattgatgcgctcgcttctgtt
ttgcccttgatttcaggagtccatttagacgatggcgatgaatattttgacccttcaaaa
ttggttatcaccaacttgcatgcagggttaggagcgaataatgtaacgcccgcaagcgta
gaagtcatttttaatgcgcgccattctttaaaaaccaccaaagaaagtttgaaagaatat
ttagaaaaggttttaaaaagcactccttacactttagaattagaatcaagcagttcgcct
ttcatcacggcttctcattcaaagcttgccagcgttttaaaagaaaatattttaaagaca
tgccataccaccccccttttaaacaccaaaggcggcacgagcgatgcacgattttttagc
gctcatggcatagaagtggtggaatttggcgtcattaatgataggatccatgccattgat
gaaagggtgagcttgaaagaattagagcttttagaaaaagtgtttttgggggttttagag
aatttgagcgagaaataa
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