KEGG   Helicobacter pylori Aklavik117: HPAKL117_00255
Entry
HPAKL117_00255    CDS       T02352                                 
Name
(GenBank) Proline/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
hpya  Helicobacter pylori Aklavik117
Pathway
hpya00250  Alanine, aspartate and glutamate metabolism
hpya00330  Arginine and proline metabolism
hpya01100  Metabolic pathways
hpya01110  Biosynthesis of secondary metabolites
Module
hpya_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:hpya00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    HPAKL117_00255
   00330 Arginine and proline metabolism
    HPAKL117_00255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hpya03000]
    HPAKL117_00255
Enzymes [BR:hpya01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     HPAKL117_00255
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     HPAKL117_00255
Transcription factors [BR:hpya03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    HPAKL117_00255
SSDB
Motif
Pfam: Aldedh Pro_dh
Other DBs
NCBI-ProteinID: AFX90472
LinkDB
Position
complement(53637..57194)
AA seq 1185 aa
MQKIIDDSLELAKKLQDSISNHLSEQEKAFHSKMQKLLNNPENKVMLIELMDRSFRCLDN
KARFEMIEHVLDKYKSREIFSSFEKLLLMGFLSFGKMLPDMSVPFFVNKIRSDTKAMVLD
QEESQLKERILKRKNEKIILNVNFIGEEVLGEEEANARFEKYSQALKSNYIQYISIKITT
IFSQINILDFEYSKKEIVKRLDALYALALEEEKKQGMPKFINLDMEEFRDLELTVESFME
SIAKFDLNAGIVLQAYIPDSYEYLKKLHAFSKERVLKGLKPIKIRFVKGANMESEETIAS
VKDWALPTFSNKQDTDSNYNKMLDFVLEGDNYKYIHIGAASHNIFEIAYVYTRIHALNDP
VVLEHFSFEMLEGMSLQASQELKEMHKLILYAPVCDEAHFNNAIAYLVRRLDENTSSDNF
MKAFFNLKVGTIEWKDQEQRFLNSLKGIATLDNATHRTQDRNAKQNAHTTYPNHSFKNES
DTDFILKANREWAKKVREKMHNAPILELYPEMDGRFEDPNLTPLEVFDKIHHKKIASVHL
ADREAILKALEVAKSDKSRFSQKSFIEIHALMSQTAQIFRERRGDLIGISALEVGKTFAE
TDAEVSEAIDFLEFYPYSLRVLQEQNKKTKFTPKGVGVIIAPWNFPVGISVGTIAAPLAA
GNRVIYKPSSLSSVTGYKLCECFWDAGVPRDALIYLPSKGSDISEHLLKDESIKFAILTG
GEDTAYKMLEANPTLALSAETGGKNATIVSKMADRDQAIKNVIHSAFSNSGQKCSATSLL
VLEKEVYEDENFKKTLIDATLSLSVGDPFDFKNKIGALADKPNEKVIKAIDELKSYENYE
IPVSFVNDNPYLMRPSIKYGTKKGDFTHQTELFTPILSVMKAQDLDEAIEIVNSTGYGLT
SALESLDEREWEYYLERIEAGNIYINKPTTGAIVLRQPFGGVKKSAVGFGRKVGIFNYIT
QFVNIYQEEEDENALKNPLSEALEGLTQKGYDEHTHELRRAIFMAKSYAYHYKHEFSQAK
DYVKIRGEDNLFSYTKVKSVGYRITEKDTLSDMLGVALACLISQIPLTISIENEQANKDL
SFFLECLKALRANAPIVYESLQKFSEKLNAFNRVRYLKSDLDLLHKQASALGIVLATAKP
CLNGRFELLYYHLERSVSISYHRYGNLGSRVLRQPTCHKSCCAEK
NT seq 3558 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcattgacgattcattagaattagccaaaaaactgcaagatagtatcagt
aaccatttgagcgagcaagaaaaagcgttccactctaaaatgcaaaagcttttaaataac
cccgaaaacaaagtcatgctcatagagcttatggatcggagttttagatgcctggacaat
aaagcccgctttgaaatgattgagcatgttttagacaaatacaaaagccgtgagattttt
tcttcctttgaaaaattgcttttaatggggtttttaagctttgggaaaatgctccctgat
atgagcgtgcctttctttgtcaataaaatcagaagcgacacgaaagcgatggtcttggat
caagaagagagccaattaaaagagcggattttaaaaagaaaaaatgaaaaaatcattttg
aatgtgaattttattggcgaagaggttttaggcgaagaagaagctaatgcacgttttgaa
aaatactctcaagccctaaaatccaactacattcaatacatttccattaaaatcacaacg
attttttctcaaatcaatatccttgattttgaatactctaaaaaagagattgtcaaacgc
ctagacgctctttatgccctagctttagaagaagaaaaaaagcaaggcatgcctaaattt
attaatttggatatggaggaatttagggatttagagctcacggtggagtcttttatggag
tctatcgctaaatttgatttgaacgctggtattgtgttgcaagcctatatcccggattct
tatgaatatttgaaaaaactgcacgctttttctaaagaaagggttttaaaagggttaaag
cccattaaaatccgctttgttaagggagcgaacatggagagcgaagagactatcgcttcc
gtgaaagactgggcgttacccacattttctaataagcaagacaccgattctaattacaat
aaaatgctggattttgttttagagggcgataattataaatacattcatattggcgcagca
agccataatatttttgaaatcgcttatgtttatacgcgcatccatgcccttaatgacccc
gttgtgttagagcattttagctttgaaatgctagagggcatgagcttgcaagcgagccag
gaactaaaagagatgcacaaactcattctttatgcgccggtgtgcgatgaagcgcatttt
aataatgcgatcgcttacttggtgaggaggttagatgaaaacacctcaagcgataatttc
atgaaggctttctttaatctcaaagtaggcacgatcgaatggaaagaccaagaacaacgc
tttttaaacagccttaaaggaatcgctactttagacaatgccacccacaggactcaagac
agaaacgccaaacaaaacgctcataccacctacccaaaccactcctttaaaaacgaaagc
gataccgattttattttaaaagccaaccgagaatgggctaaaaaagtgcgcgaaaaaatg
cataacgcccctattttagagctttacccagaaatggatgggaggtttgaagatcctaat
ttaacccctttagaagtctttgataaaatccatcataaaaaaatcgctagcgtgcattta
gcggatagggaagcgattttaaaagccctagaagtggctaaaagcgataagagtcgtttc
agccaaaaaagctttatagaaatccatgccttaatgagtcaaaccgcccagatttttaga
gaaaggcgaggcgatttgatagggatttcggctttagaagtgggtaagactttcgctgaa
acggacgctgaagtgagcgaagccattgactttttagagttttacccttacagcttaagg
gtgttacaagagcaaaataaaaaaacgaaattcacccccaaaggcgtgggtgtgatcatt
gccccatggaatttccctgtgggcatttctgtaggcactatcgctgcccccctagccgct
ggcaatcgggtgatttacaagccctcaagtttgtctagcgtaacaggttataagctttgt
gagtgcttttgggatgcgggcgtgcctagagatgcgctcatttacttgccatctaaaggg
agcgatattagcgagcatcttttaaaagatgaaagcatcaagtttgccattttaacaggg
ggcgaagacaccgcttataaaatgctagaagctaaccccactttagccttgagcgctgaa
acaggcggtaaaaacgccactattgtgagcaaaatggcagacagagatcaagcgattaaa
aatgttatccattcagcttttagcaattcggggcaaaaatgctccgccacttcgctttta
gtgttggaaaaagaagtctatgaagatgagaattttaaaaagactctaatagatgcgact
ctaagccttagcgtgggcgatccttttgatttcaaaaacaaaatcggcgctctagcggac
aagcctaatgaaaaggtcatcaaagccatagacgaattgaaaagctatgaaaattacgaa
atcccggtaagctttgtcaatgataacccctatttgatgaggccaagcatcaaatacggc
actaaaaaaggcgatttcacgcaccaaactgagctttttacgcccattttatccgtgatg
aaagcgcaagatttagacgaagcgatagagatagtcaattctaccggttacgggctgacg
agcgcattagagtctttggacgaaagggagtgggaatattatttagaacgcattgaagcc
ggtaatatctatatcaacaaacccaccacaggagcgattgttttgcgccagccttttgga
ggggttaaaaaatccgctgtggggtttgggagaaaagtaggcatttttaactatatcacg
caatttgtgaatatttaccaagaagaagaagatgaaaacgccctaaaaaaccccttaagc
gaagctttagagggcttgactcaaaaaggctatgatgaacacacgcatgagttgaggcgc
gcgatttttatggcaaagagctacgcttatcattacaagcatgaatttagccaagctaaa
gactatgtcaaaatcagaggcgaagacaaccttttttcctacaccaaagttaaaagcgtg
ggttatcgcatcaccgaaaaggacaccttaagcgatatgttaggcgttgctttggcatgt
ttaatctctcaaatccctttaacgatcagcatagaaaacgaacaagcgaacaaagattta
tcatttttcttagaatgcttaaaagcgctccgagcaaacgcccccattgtttatgaaagc
ttgcaaaaatttagcgagaaattgaacgctttcaatcgtgtccgttatttaaaaagcgat
ttggatttattgcacaaacaagcgagcgccttagggattgttttagccacggctaaacca
tgcctaaacgggcgttttgaattgctgtattaccacttagagcgatcggttagcatctct
tatcatcgttacgggaatttaggctcaagggttttaaggcaaccaacttgccacaaatca
tgctgtgctgaaaaataa

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