Helicobacter pylori SouthAfrica20: HPSA20_0773
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Entry
HPSA20_0773 CDS
T02807
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hpys
Helicobacter pylori SouthAfrica20
Brite
KEGG Orthology (KO) [BR:
hpys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpys03009
]
HPSA20_0773 (rimO)
Enzymes [BR:
hpys01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPSA20_0773 (rimO)
Ribosome biogenesis [BR:
hpys03009
]
Prokaryotic type
ribosomal protein modification factors
HPSA20_0773 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Rotavirus_VP3
CLP1_P
DUF2981
Spidroin_N
Ca_bind_SSO6904
Motif
Other DBs
NCBI-ProteinID:
AGT74010
UniProt:
T1U9G2
LinkDB
All DBs
Position
complement(725638..726957)
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AA seq
439 aa
AA seq
DB search
MQVKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDAKNADVILINTCGFIESAKQES
IQTILNAAKDKKKGALLIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDILIAKKQNQ
FSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVE
DLALKGYKDMTFIAQDSSSFLYDKGQKDGLIQLIKAIDKQQALKSARILYLYPSSTTLEL
IGAIENSPVFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQVQESFIRSTIIVG
HPEENEGEFEELSAFLDEFQFDRLNIFAFSAEENTHAYSLEKVPKKIINARIKALNKIAL
KHQNHSFKALLHKPIKALVENKEGEYFYKARDLRWAPEVDGEILINDSTLDTPLKPGHYT
IVPSAFKDNILLAKVLSPF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttaaagaaaacaaacaactctgcctgatctcattaggttgctctaaaaatttg
gtggattcagaagtgatgttaggcaagctctataactacacgctcactaatgacgctaaa
aacgctgatgtgattctgattaatacttgcggttttattgaaagtgctaaacaagagagt
atccaaaccattctcaacgctgctaaagacaagaaaaagggcgcgcttttgattgcgagc
gggtgcttgagcgagcgttataaagatgaaatcaaagagttgatccctgaagtggatatt
tttaccggagtgggggattatgacaagatcgatattttaatcgctaaaaaacaaaaccaa
ttcagcgagcaagtgtttttaagcgagcattataacgcgcgcatcatcacgggatcgagc
gtgcatgcttacgttaaaatttctgagggctgtaaccaaaaatgctctttttgcgccatt
cctagctttaaggggaaattgcaaagcagggaattagactccattttaaaagaagtagaa
gatctagcgcttaaaggctataaagatatgacttttatcgctcaagattccagctcattt
ttatacgataaggggcaaaaagacggcttgatccagctcatcaaggcgattgacaagcaa
caagccttaaagagcgcgcgtattttatacctctacccctctagcaccactttagagctg
attggcgcgattgaaaactcgcccgtttttcaaaattattttgacatgcccatccagcat
atcagcgactccatgcttaaaaaaatgcgccgcaactccagccaagcgcaccatttaaag
cttttaaacgccatgaagcaggttcaagaaagctttataagaagcacgattattgtaggg
catccagaagaaaatgagggcgaatttgaagaattgagcgcgtttttagatgagttccaa
tttgatcgattgaatatttttgctttcagcgctgaagaaaacacgcatgcctattctttg
gagaaagtgcctaaaaaaatcattaacgctcgcattaaagctttgaataaaatcgcttta
aaacaccaaaaccattcttttaaggccttgttacataagcctattaaggcgttagtggaa
aataaagaaggagagtatttttacaaagcaagggatttgaggtgggcgcctgaagtggat
ggggaaattttaatcaatgacagcacattagacacccccttaaaacccgggcattacacg
attgtgcctagcgcttttaaagacaatatcttactcgctaaggttttaagccctttttag
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