Herbaspirillum rubrisubalbicans: Hrubri_0024
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Entry
Hrubri_0024 CDS
T04238
Symbol
hsdM
Name
(GenBank) Type I restriction-modification system methyltransferase subunit protein
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
hrb02048
]
Hrubri_0024 (hsdM)
Enzymes [BR:
hrb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
Hrubri_0024 (hsdM)
Prokaryotic defense system [BR:
hrb02048
]
Restriction and modification system (R-M system)
Type I R-M system
Hrubri_0024 (hsdM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
UPF0020
Eco57I
MTS
EcoRI_methylase
Motif
Other DBs
NCBI-ProteinID:
ALU87258
LinkDB
All DBs
Position
28564..30075
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AA seq
503 aa
AA seq
DB search
MSATPIQQDAINAAVWNACDTFRGTVDPSIYKDYVLTMLFLKYISDIWQDHYDRYKAEHG
DHPALIEELLKNERFVLPRSANFYALHDARHQPGNGERIDKALHAIEEANLTKLRDVFQD
ISFNSTKLGDEAQKNDILRHLLEDFAKPELDLRESRVGSLDVIGNAYEFLIKNFASTSGK
KAGEFYTPPEVSQLMARLMVPEEGDEICDPTCGSGSLLMKCGQLIRAKAGSRKYALFGQE
AIGSTWALAKMNMFLHAEDNHRIEWGDTLRNPKLLDGKGLLKHFDIVVANPPFSLEKWGH
EAAADDPYKRFRRGLPPRTKADYAFILHMVETMKPGTGRMAVVVPHGVLFRGAAEGNIRQ
KLIEENLLDVVIGLPEKLFYGTGIPAAILMLRKKKSDDKVLFIDASRDFQDGKNQNILRP
QDLERIEQTVRERQSVEKYAYLASPAEIAENEFNLNIPRYVDTFEEAEAIDLKAVREERL
KLKAELAVLEEKMAGYLKELGYE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctacccccattcagcaagacgccatcaatgccgccgtctggaacgcctgcgac
accttccgcggtaccgtggacccgagcatctacaaggactacgtcctgacgatgctcttc
ctgaagtacatttccgacatctggcaagaccattacgaccgctacaaggccgagcacggg
gatcacccggccttgattgaagagctgctgaaaaacgagcgctttgtactgcctcgcagc
gccaacttctacgccttgcatgacgcccgacatcagcccggcaacggggagagaatcgac
aaggctctgcacgccatcgaagaggccaacctgacgaagctacgcgatgttttccaggac
atcagcttcaattccaccaagctgggcgacgaggcgcagaagaacgacatcctgcgtcac
ctcctggaagactttgccaagcccgagctcgatctgcgtgaaagccgggtcggcagcctc
gacgtgatcggcaatgcctatgaattcctgatcaagaactttgcctcgaccagcggcaag
aaggccggcgagttctatacgccgcccgaagtgtcccagctcatggctcgcctgatggtc
cccgaggaaggggacgaaatctgtgacccgacctgcggctcaggctccctgctgatgaag
tgtggacagctcattcgcgccaaggcgggtagccgcaaatacgcgctctttgggcaggag
gccatcggtagcacctgggcgctagccaagatgaacatgttcctccatgccgaggacaat
caccgcatcgaatggggcgacaccctgcgcaaccccaagctgctcgatggcaagggcttg
ctcaagcactttgatatcgtcgtggccaatccacctttctcgctggagaagtggggacac
gaagccgcggccgatgacccctacaagcgttttcgccgtggcctgcccccgcgcaccaag
gctgactacgccttcatcttgcacatggtcgaaaccatgaagccgggcacgggccgtatg
gccgtggtggtgccgcacggcgtgcttttccgtggcgccgccgagggcaacatccgtcag
aagctgatcgaagaaaacctgctcgatgtggtcatcggcctgcccgagaagctgttctac
ggcacgggtattccggccgccatcctgatgttgcgcaagaagaagtccgacgacaaggtg
ctctttatcgacgccagtcgtgattttcaggacggtaaaaaccagaacatcctccgcccg
caagacctcgaacgcatcgagcaaaccgtgcgcgaaaggcagagcgttgaaaagtacgcc
tacctcgccagcccggccgagatcgccgaaaacgaattcaacctcaacatcccgcgctat
gtcgacaccttcgaagaggccgaggccatcgacctgaaggccgtgcgcgaagaacgcctg
aagctcaaagccgagctggcggtgctggaggaaaaaatggccggctatctgaaagaactg
ggctatgagtga
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