Herbaspirillum rubrisubalbicans: Hrubri_0261
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Entry
Hrubri_0261 CDS
T04238
Symbol
lacA
Name
(GenBank) beta-galactosidase
KO
K12308
beta-galactosidase [EC:
3.2.1.23
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00052
Galactose metabolism
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Hrubri_0261 (lacA)
Enzymes [BR:
hrb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Hrubri_0261 (lacA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42
Glyco_hydro_42M
Glyco_hydro_42C
Glyco_hydro_14
Glyco_hydro_35
DUF6020
Motif
Other DBs
NCBI-ProteinID:
ALU87490
UniProt:
A0A0U3L9Z1
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All DBs
Position
complement(293191..295164)
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AA seq
657 aa
AA seq
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MSLRLGVCYYPEHWPEAMWDSDAQRMKALGIQQVRIGEFAWSRIEPSPGDLRWDWLDRAI
EVLAKHGLEVVMCTPTATPPKWLIDRHDDVLAVDANGRQRGFGSRRHYDFSSDSYYEESQ
RIVRLLGERYGQHPAVTAWQLDNEYGCHQTVVSYSSSAQRRFRQWLRQRYGSIDALNTAW
GTVFWSMEYRSFDEIDAPIGTVTEAHPSHRLDYRRFASDEVVRYNQMQVEILRPLSPGRL
MVHNFMQMFLEFDHYPVAADLDVATWDSYPLGALEVMWFDPHTKARWLRTGHPDFASFNH
DLYRGMSAKPFWVMEQQPGPVNWAHWNPAPLPGMVRLWSWEAFAHGAGCVSYFRWRQCPF
AQEQLHAGLNRPDNRLDVGGSEAERVAQEIISVQAAHGELSQPRGKVALLFDYDAKWLFE
IHFQGIDFEYAHFAFDYYSTLRALGLDVDIVPLNADLQGYAMIVVPPLPIVPDDLPARIA
QSGAQVVFGPRSGSKTKSLQIPSTLPPGPLQQLLPMRVWRVESMRPNVSEAVQFGTVPGQ
ARYWRDLIEADGEGLQTIARFGDGHPAIVQKERAHYLAGIFDAELTSRYFEQVARAAGLT
PQRLPEGLRLQQRGGLQFAFNYSDAPITLPRSEGAQFLVGQAALEPQGVAIYRSQQA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacgattgggagtctgttactaccctgaacattggcccgaggccatgtgggac
agcgacgcacaacgcatgaaggcactcggtatccagcaggtgcgcatcggcgaatttgcc
tggagccgcatcgaaccgtcgccgggcgatctgcgctgggattggctggaccgtgccatc
gaggtgttggcaaaacacggactggaagtggtgatgtgcacccccaccgcaaccccgccc
aagtggctcatcgaccgccacgacgatgtgctggcagtggacgccaatggtcgccagcgc
ggcttcggctcacgccgtcattatgatttttcgtcggattcctattacgaggaatcgcag
cgcatcgtgcgcctgctgggcgagcgctatggccagcacccggccgtgaccgcctggcag
ctcgacaatgaatacggttgccaccagaccgtggtcagctattcgtcttcggcccagcgc
cgtttccgccagtggctgcgccagcgctacggcagcatcgatgcgctcaacacggcttgg
ggcacggtgttctggagcatggagtaccgcagcttcgatgaaatcgatgcgcccatcggc
accgtcaccgaagcccatccgtcgcatcgtctcgactatcgccgctttgcctcggacgaa
gtggtgcgctacaaccagatgcaagtcgagatcctgcgcccgctctcgccgggccggctg
atggtgcacaacttcatgcagatgttcctggagttcgatcactacccggtggccgccgat
ctggacgtggccacctgggatagctatccgctgggcgccctggaagtgatgtggttcgac
ccgcacaccaaggcccgctggctgcgcaccggccatcctgactttgccagcttcaaccat
gacctctatcgcggcatgtcggccaagccgttctgggtgatggaacagcaacccggcccg
gtgaactgggcacactggaacccggcaccactgccgggcatggtgcggttgtggagctgg
gaagccttcgcccacggcgccggttgcgtgtcctatttccgctggcgccaatgcccgttc
gcgcaagagcagttgcacgccggcctgaaccgtcccgacaatcgcctcgacgtcggcggc
tcggaagccgaacgggtggcccaggaaatcatctccgtgcaagcggcccatggcgagctg
tcccagccgcgtggcaaggtggcgctgctgttcgactacgatgccaagtggctcttcgaa
atccacttccagggcatcgatttcgagtacgcccattttgctttcgactactactcgacc
ctgcgcgcgctcggcctggacgtggacatcgtgccgctcaatgccgacctgcagggctat
gccatgatcgtggtgccgccgctgcccatcgtaccggacgacctgccggctcgcatcgcg
caaagcggcgcacaggtggtgttcggtccgcgcagcggctccaagaccaagtcgctgcag
atcccttcgaccctgccaccgggaccgctgcagcaattgctgccgatgcgtgtgtggcgc
gtcgaatcaatgcgtcccaacgtcagcgaagcggtgcagttcggtaccgtaccaggccag
gcccgttactggcgcgacctgatcgaagccgatggcgaaggcctgcagaccatcgcccgt
ttcggcgacggccatccggccatcgtgcagaaggagcgcgcccattacctggctggcatc
ttcgatgccgagctgacctcgcgctacttcgaacaggtagcccgcgcggccggactgacc
ccgcaacgcctgcccgaagggctgcgcctgcaacaacgcggcggtctgcagttcgccttc
aactacagcgatgcaccgatcaccctgccgcgttctgagggtgcgcagttcctggtcgga
caggcggcgctggagccacagggtgtggccatctatcgtagccaacaggcatag
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