Herbaspirillum rubrisubalbicans: Hrubri_0821
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Entry
Hrubri_0821 CDS
T04238
Symbol
deoC
Name
(GenBank) 2-deoxyribose-5-phosphate aldolase protein
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00030
Pentose phosphate pathway
hrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Hrubri_0821 (deoC)
Enzymes [BR:
hrb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
Hrubri_0821 (deoC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
ALU88038
UniProt:
A0A0U3K5N6
LinkDB
All DBs
Position
complement(939770..940801)
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AA seq
343 aa
AA seq
DB search
MNMTRNTPSLRATQGEAAAAPVEVAAAGHTRNSVQPYDAAAFEHLRINLSAAEKRVSTLK
GRRSVKKDAQAAWLLKAITCIDLTTLSGDDTPQRVRRLCAKAANPLRADLLEALGMQERG
LTTGAVCVYHRFVKTAVEALQGKSIPVAAVSTGFPAGLNPHALKLKEIEASVRDGAAEID
IVITREHVLTGNWEALYGEMRDFRQACGEAHVKAILATGELKTLRNVAKASMVCMMAGAD
FIKTSTGKESVNATPLVSLVMLRMIRQYQEMTGIKVGYKPAGGVATAKDVLEYQVLMKEE
LGDHWLQPDLFRVGASSLLADIERQLEHHVTGRYSAFNRHAIG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgacccgcaacaccccttccctgcgcgctacgcagggcgaggccgctgccgcg
cccgtcgaggttgccgccgccggccatacgcgcaatagcgtgcagccctatgacgcggca
gccttcgagcatctgcgcatcaacctgagcgcggccgaaaagcgcgtgtccaccctcaag
ggccggcgctcggtcaagaaggatgcgcaggccgcctggttgctcaaggccatcacctgc
atcgacctgaccacgctgtcaggcgacgataccccgcaacgcgtgcgccgcctgtgtgcc
aaggccgccaacccgctgcgcgccgatctgctggaggcgctggggatgcaggagcgtggc
ctcaccacgggcgcggtgtgcgtctatcaccgcttcgtcaagaccgcggtggaagccttg
cagggcaagtccattccggtggcagcggtgtctaccggttttcctgcgggcctcaatcct
catgccttgaagctcaaggaaatcgaagcctcggtacgcgatggcgccgccgagatcgat
atcgtcatcacccgcgagcacgtgctgaccggcaactgggaagcgctctatggcgagatg
cgcgactttcgccaggcctgtggcgaggcccacgtcaaggccatcctggccaccggtgaa
ctcaagaccctgcgcaatgtggccaaggcgtcgatggtgtgcatgatggccggcgccgat
ttcatcaagacctccaccggcaaggaaagcgtcaacgccaccccgctggtgtcgctggtg
atgctgcgcatgatccgtcagtaccaggagatgaccggcatcaaggtcggctacaagccc
gctggcggcgtggccacggccaaggacgtactcgaatatcaggtgctgatgaaagaagaa
ctgggtgaccactggttgcagccggacctcttccgcgtcggggcatcaagcctgctggcc
gatatcgaacgccagttggaacaccacgtcaccggccgttactccgccttcaaccgccat
gccatcggctag
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