Herbaspirillum rubrisubalbicans: Hrubri_1894
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Entry
Hrubri_1894 CDS
T04238
Name
(GenBank) sugar phosphate isomerase (involved in capsule formation) protein
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00540
Lipopolysaccharide biosynthesis
hrb01100
Metabolic pathways
hrb01250
Biosynthesis of nucleotide sugars
Module
hrb_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Hrubri_1894
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Hrubri_1894
Enzymes [BR:
hrb01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
Hrubri_1894
Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Lipid A
Hrubri_1894
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
ALU89087
UniProt:
A0A0U3LWT3
LinkDB
All DBs
Position
complement(2180980..2181927)
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AA seq
315 aa
AA seq
DB search
MRTTGIRVFQEQAQALNMIAERLADEFEQAVELMYATRGRVIVSGMGKSGIIGSKIAATL
ASTGTSSFFVHPGEAYHGDLGMFTEADTAILISYSGETEEVIRLIPSLRHFGLRIIAIVG
KRNSTLGKNADVVLDVSVPREACPNNLAPTTSTTATLVMGDALAVALIEKRDFKPNDFAR
FHPGGSLGKRLLTRVKDVMHTQVPWVMRETPIIDVIGQMTEGGLGMALVSADDSRQTLCG
VITDGDLRRALAARKDIYHITAADLMNTSPKTVPENEMFVDAETKMLELNITALVALNEA
QHVVGVLKLLDAKRL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaccggaatccgggtcttccaggaacaggcgcaggccctgaacatgatcgcc
gagcgcctggccgatgaattcgagcaggccgtcgaattgatgtatgccacccgtggtcgg
gtgatcgtctcgggcatgggcaagtccggcatcatcggcagcaagatcgccgccaccctc
gcctccaccggcacctcttccttcttcgtgcaccccggcgaggcctatcacggcgatctt
ggcatgttcaccgaagccgataccgccatcctgatttcctacagcggcgaaaccgaagaa
gtgatccgcctgatcccctcactgcgccacttcgggctgcgcatcatcgccatcgtggga
aaacgcaactccaccctgggcaagaacgccgacgtggtgctggatgtctcggtgccacgt
gaagcctgccccaacaacctggcgccgacgacctcgaccaccgccaccctggtgatgggc
gatgccctggccgtggccttgatcgaaaaacgcgacttcaaacccaatgacttcgcccgc
ttccatcctggcggcagcctgggcaagcgcctgctcacgcgcgtcaaggatgtgatgcat
acccaggttccatgggtgatgcgcgagacaccgatcatcgacgtgatcggccaaatgacc
gaaggcggcctgggtatggccctggtcagtgccgacgacagccgtcaaacactgtgtggg
gtgatcaccgacggcgacttgcggcgcgccctggccgcacgcaaggacatctatcacatc
accgcagccgacctgatgaatacctcgcccaagacggtgccggaaaatgagatgttcgtc
gatgccgagaccaagatgctggaactgaacatcaccgccctggtggcgctcaacgaagcg
caacatgtggtgggcgtactcaagctgctggacgccaaacgtctgtaa
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