Herbaspirillum rubrisubalbicans: Hrubri_3933
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Entry
Hrubri_3933 CDS
T04238
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase beta chain protein
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00362
Benzoate degradation
hrb00624
Polycyclic aromatic hydrocarbon degradation
hrb01100
Metabolic pathways
hrb01120
Microbial metabolism in diverse environments
hrb01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Hrubri_3933 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
Hrubri_3933 (pcaH)
Enzymes [BR:
hrb01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Hrubri_3933 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ALU91083
UniProt:
A0A0U3L6U1
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Position
4633635..4634327
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AA seq
230 aa
AA seq
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MQFDAIEPGVYPELIYPPYKSTVKRGPTQAPLRVRDETATGSNLFASPKLILPHDMDLTK
QGKGEPLGEKIVVTGRVLDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFG
KMLTDDDGRYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFA
YDPIFQSIPDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPMGI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcgatgccatcgaacccggtgtctatccggaactgatctatcccccttacaag
tccaccgtcaagcgtggccccacccaggcgccgctgcgcgtgcgcgatgagaccgccacc
ggcagcaacctgttcgcctcgcccaagctgatcctgccgcacgacatggacctgaccaag
cagggcaagggcgagccgctgggcgaaaagatcgtggtcaccggtcgcgtgctggacgaa
gatggcaagccggtgcgcaattccctgctggaagtctggcaatgcaatgccgccggtcgc
tacttccacaagaaggaccagcacgacgccccgctggaccccaacttcaccggctttggc
aagatgctcaccgatgacgacggccgctaccgcttcgtctccatcaagcccggcccgtat
ccctggggcaaccaccacaaggcctggcgtccggcgcacatccacttctcgctgttcggc
aacgtctatgcacagcgcctggtgacccagatgtacttccccaacgacccgctgttcgcc
tacgacccgatcttccagagcatccccgacgaagccgcccgccagcgcctgatctcgcgt
ttctcgctggaagaaacggtggacgacaagatgctgggctatgaattcgatatcgtcctg
cgcggccgcaacgccacgcccatgggcatctga
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