Haliotis rufescens (red abalone): 124134999
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Entry
124134999 CDS
T07893
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03440
Homologous recombination
hrf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124134999
03460 Fanconi anemia pathway
124134999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124134999
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124134999
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
124134999
FA (Fanconi anemia) pathway
Downstream FA components
124134999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
124134999
NCBI-ProteinID:
XP_048252034
LinkDB
All DBs
Position
Unknown
AA seq
1377 aa
AA seq
DB search
MTTVPGNQQYKIGGVSVHFPCKPYPSQFSMMDKIIKGIERRQNCLLESPTGSGKSLALLC
SALAWQRAETEKRDQEEARKQKVLEDAANGVSGCLCNCHIDAAKHKSEGDSTSAYFPPPE
GAAATPCAKEKDIICVDDDGDGDFKEDSKTFRTPGTHQPSLSKKLRRHVIIEYDDSPIKP
GTMDTPKVESMEVNTKIETVNMVSPPITDCQECDCATLSTSKKKKIPRIYFGTRTHKQVA
QIVRELKKTAYLDVSMTILGSREHTCIHPVVSKMASKNEGCQELLKGPGCRMKDRAKSIS
SQEGIRRMGLMTAWDLEDMVNMCKKQKACPYFLTRALKEQSEIIICPYNYLVDPIIRESM
EINLKDQIIILDEAHNIEDSSREAGSQSLRQELIQKAITELRAMVNAGVDASDSMLLEKV
MTGLDQFVHLHSDKLEQKDFDQSYKIWSGFDIVAQMDCIGLGPVKYPEAKKSFGVLVEDK
DEVVRNALGEEVKLSPPVKTLIEQLLVALDYLYRDDMKFVEDYRVSIVKTTTFVSNQPTN
GAWLNPRQRHGGQRRVPTVISTLNFWCMNPAVAFSDFQNCRSIVLSSGTLSPMSSFSSEL
GMTFSIQLEANHVIKDDQVWVGAIGQGPSGTSLQAVYRNIETFNFQDELGHLVLRVCKTV
PHGVLCFFPSYKCLEKLTNRWKATGLWDKMFQQKKIVAEPRGSDKMNFEELMHLFYDAVE
SRGDEDKDGALFLAVCRGKVSEGLDFADNFARAVITVGIPYPNFKDIQVELKRKYNDKHK
AARGLLSGSDWYEIQAFRALNQALGRCIRHRRDWGALIIVDERFVKNPQKYHKGLSKWVR
NKAVSYNTFNSAMDSLSCFTKLRIETMENEEAEASFISSTPCTQSVNEAMPRTPLQDKAN
ITPPSVSVHKGDTSIYGHMTSHSPMYLTPDLGIKTEARRSKTEADVKVIGHSGKMCLEQN
VGVASQTGKQNIVNNIVLGQKVMTLNETPGKGDDKPSLRPHLGDLGKKMVVSPANPGSGH
NVKQTKIVFKFEYKGTDTQNKRGDTTLNENGIESHLSDSAITTEKQSLVAGSNTNVVKQE
LGSFNQNLEKDMKSNRFFKFCHVPRRDSLGCERLDQSVDDGQDSGTNPPETEPLVSDAAK
STSPLLFDGNSDPLSSVSEQHETATKKPLFKRKSRSGCLEGSSVDCKEMLEDHVKEKHGS
KEDTCDIDDLEGLMVKRRSSRQKKRKSDGTAKLVSKRSRGIDFLDEVQEDGYQKSKQITC
SECGCVLLDGVKDFEKRKRVPCFMKLPGGTGVPDVVYLPAQPLGDSLQAFSAVLENGVTL
DCHCDAEAGVVVQFLHCNKCGGQPDCRDVLGCRVLLSTDSQYQRGQMWLNLQKVKIS
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtaccaggcaaccagcagtacaagatcgggggtgtgtctgtacatttcccc
tgcaagccatacccctcccagttcagtatgatggacaagataatcaagggtattgagagg
agacagaactgtttactggagagtccaacaggaagtggaaagagtcttgccctgctgtgt
tcagccctagcctggcagagagccgagacagagaagcgagatcaagaagaagcaagaaag
cagaaagttcttgaagatgcagcaaatggagtgtctggatgtttgtgcaactgtcatata
gatgcagccaaacacaagtctgagggagactcgacgtcggcctacttcccccctccggaa
ggggctgcagcaacaccttgtgctaaagagaaagatatcatctgtgttgatgatgatggt
gatggtgattttaaagaagactccaagactttcaggactcctggcacccaccagccaagt
ttatccaaaaagcttcggagacatgtgatcattgaatatgatgactctccaataaaacca
ggcaccatggacacgcccaaggttgagagtatggaagtcaacacgaagatagagacagtc
aatatggtgtctccccccatcacagactgccaggaatgtgactgtgccactcttagcacc
agcaagaaaaaaaaaatccctcgaatctacttcggaacccgcacacacaaacaggtagct
cagattgtccgggaactgaagaaaacagcctaccttgacgtcagcatgacgatactgggg
agtagggagcacacctgtatccaccccgtggtgtccaagatggccagcaagaacgagggc
tgtcaggaactgttgaagggtcctggctgtcggatgaaggaccgggccaagtccatctca
agccaggagggcatccgtcggatggggctgatgacggcctgggacctcgaggacatggtg
aacatgtgcaagaagcaaaaggcctgtccctacttcctgacacgagctctgaaggaacaa
tctgagatcatcatctgcccctacaactacctggtggaccctatcatcagagagagcatg
gagataaacttgaaggaccagataatcatcctagatgaggctcacaacattgaggactcg
tcacgggaagcgggcagtcagagcttgagacaggagctcatacagaaggccatcacagag
ctgcgagccatggtgaacgctggagtagatgcatcagactcaatgttgctggagaaggtg
atgactggactggaccagtttgtacacctacattcagacaaactggaacagaaggacttt
gatcagtcgtacaagatctggtcggggttcgacatcgtggcacagatggattgtatcgga
ctgggcccagtgaagtatcccgaagctaagaaatcgtttggcgtgttggttgaggataaa
gacgaggtggtccggaacgccctgggtgaggaagtcaaactgagtcctccagtgaagacc
ctgatagaacagctcctggtggcgctggactacctgtaccgggatgacatgaagttcgtg
gaggattacagggtctccatcgtcaagacaacaacatttgtatcaaatcaaccaacgaat
ggtgcttggttgaatccgaggcaaaggcatggagggcagaggagagttcccacggtgatc
tcgacactcaacttctggtgcatgaaccctgcagtggctttctcagacttccagaactgc
cgcagtatcgtgttgagcagcggaacgctgtcaccgatgtcatccttctcctcggagctt
gggatgacctttagtatacagcttgaagccaaccatgtcatcaaggatgatcaggtgtgg
gtaggtgctataggtcagggccccagtgggacgtctctccaggcagtctacaggaatata
gagaccttcaacttccaggatgagcttggacacctggtgctccgcgtctgtaagactgtg
ccccatggtgtgctgtgtttcttcccctcctacaagtgcctggagaaactcaccaacaga
tggaaggctactggactctgggacaagatgttccagcagaagaagattgttgcagaacct
cggggttccgacaagatgaactttgaggagctgatgcatctcttctatgatgcagtggaa
tccaggggagatgaagacaaagatggcgctctgtttctggctgtgtgtcgagggaaagtt
agtgaaggacttgactttgctgacaactttgctcgagctgtgataaccgtgggaatacca
tacccaaacttcaaggacatccaggttgaattgaagaggaagtataatgacaagcataaa
gcagctcgaggtcttctgtcagggagtgactggtacgagatccaggcatttcgggcgctc
aaccaagcacttggcaggtgtatcagacacagacgagactggggagctctgattattgta
gatgagagatttgtgaagaacccccagaaataccacaaaggtttatccaagtgggtgagg
aacaaggcagtgtcatacaacacgttcaactccgccatggactcgctgtcctgcttcacc
aaactcaggatcgagaccatggagaacgaggaagctgaagcatcatttatttcaagcaca
ccttgtacccagtctgtcaatgaggcgatgccccggaccccactgcaagacaaggcaaac
atcacgcccccttctgtgtctgtgcacaagggagacacctcaatatatggtcacatgact
tctcactcaccaatgtatctcacccctgaccttggcatcaaaactgaagccagaaggtca
aagacagaggcagatgtcaaagtaattggacattctggaaaaatgtgtttggagcagaat
gttggtgtggcttcacagacagggaaacagaatattgtgaacaatattgttttgggtcag
aaggttatgacattgaatgaaacgcctggtaaaggtgatgacaagccttctctcaggcct
cacctaggtgaccttggcaagaagatggtggtgtccccagctaacccagggtctgggcac
aatgtaaaacaaaccaaaattgttttcaaatttgaatacaaggggacagatactcaaaac
aagagaggggatacaactctgaatgagaacggtatagaaagtcatttgtcagattcagcg
atcactactgagaaacagagcttggtggctggttctaacacaaatgtggttaaacaggaa
cttgggtcgtttaatcagaatctggagaaagatatgaaatcgaaccgcttcttcaaattc
tgtcatgttcctaggagggacagtctgggttgtgagcgtttagaccaatcggtggacgat
ggtcaagacagtggcaccaacccacctgaaacagaacccctggtcagtgatgctgctaaa
agcacaagtcctcttttgtttgatggaaactcggatcctctcagtagtgtttcagaacaa
cacgagactgctaccaagaaaccactttttaaacgaaagagtagatcaggttgtttagaa
gggagctctgttgactgtaaagagatgctcgaggaccatgttaaggagaaacatggcagc
aaggaagatacatgtgatattgatgaccttgaagggttgatggtcaagcgacggagtagc
agacagaagaaacgcaagtctgatggtactgccaagctagtgtccaaaagatccagggga
atagacttcctagatgaggttcaagaagatggctatcagaaatctaaacagatcacttgc
agtgaatgtggctgtgttcttcttgatggagtcaaggattttgaaaagcggaaaagagtg
ccatgtttcatgaagttgcctggaggtacaggtgtcccggatgtggtgtacctaccagcg
cagccgctgggggactctctacaggctttctctgctgtactcgaaaatggtgtgacgttg
gactgccactgtgatgctgaggctggagtagttgtccagtttctccactgtaacaagtgt
ggcggtcagcccgactgtcgggacgtcctggggtgtcgtgtacttctctcaacagattcc
cagtaccagagggggcagatgtggctcaacctacagaaggtgaagattagctag
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integrated database retrieval system
